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  Chromosome 4 - Genetic Maps - Single Contig
 

Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006204
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006204AC021566890510641        
S/G/Y/R/B/O NT_006204AC104827890530073        
S/G/Y/R/B/O NT_006204AC096953892623253UT2537  496.161 AC011658, AC096953
S/G/Y/R/B/O NT_006204AC110076894610533AFM353TC1494.60496.161 AC109819, AC110076
S/G/Y/R/B/O NT_006204AC097657896417873AFM189YC3494.60496.161 AC097657
S/G/Y/R/B/O NT_006204AC105413896535663        
S/G/Y/R/B/O NT_006204AC079237897175243        
S/G/Y/R/B/O NT_006204AC093827897391423        
S/G/Y/R/B/O NT_006204AC093779899294053        
S/G/Y/R/B/O NT_006204AC092658899870683        
S/G/Y/R/B/O NT_006204AC108516901160011        
S/G/Y/R/B/O NT_006204AC112250902912801        
S/G/Y/R/B/O NT_006204AC093906903789193        
S/G/Y/R/B/O NT_006204AC093895905682053        
S/G/Y/R/B/O NT_006204AC108495906615343        
S/G/Y/R/B/O NT_006204AC093768906643903        
S/G/Y/R/B/O NT_006204AC087106908500141        
S/G/Y/R/B/O NT_006204AC084732908905343        
S/G/Y/R/B/O NT_006204AC097484910721103        
S/G/Y/R/B/O NT_006204AC107067912181433AFMA224WC5494.60496.161 AC107067
S/G/Y/R/B/O NT_006204AC083829912682343        
S/G/Y/R/B/O NT_006204AC098582915048923AFM248VF1495.70497.301AC019279, AC023521, AC019279, AC023521, AC093161, AC098582
S/G/Y/R/B/O NT_006204AP001966915571873        
S/G/Y/R/B/O NT_006204AC108065916321691        
S/G/Y/R/B/O NT_006204AC021183916655543        
S/G/Y/R/B/O NT_006204AC079141918057863AFMA082ZD1495.70497.301 AC079141
S/G/Y/R/B/O NT_006204AC104785919536641        
S/G/Y/R/B/O NT_006204AC019279920031721        
S/G/Y/R/B/O NT_006204AC023521920063231        
S/G/Y/R/B/O NT_006204AC055833920126291        
S/G/Y/R/B/O NT_006204AC105388920753843        
S/G/Y/R/B/O NT_006204AC093862922184453AFMB343ZA9497.80499.141 AC093862, AP001940
S/G/Y/R/B/O NT_006204AC093866923662413        
S/G/Y/R/B/O NT_006204AC097478925240053        
S/G/Y/R/B/O NT_006204AC108208926914893        
S/G/Y/R/B/O NT_006204AC093759927084113        
S/G/Y/R/B/O NT_006204AC105445928842183        
S/G/Y/R/B/O NT_006204AC108038930144893AFM197YA5497.904100.061AP002083, AC108038, AP002083
S/G/Y/R/B/O NT_006204AC093781931499793        
S/G/Y/R/B/O NT_006204AC098593933829633AFM183XH4499.204100.751 AC019352, AC041013, AC098593
S/G/Y/R/B/O NT_006204AC097524934109743        
S/G/Y/R/B/O NT_006204AC093729935225873        
S/G/Y/R/B/O NT_006204AC019188937224623MFD268  4100.751 AC019188
S/G/Y/R/B/O NT_006204AC093793938750383        
S/G/Y/R/B/O NT_006204AC004054939764303        
S/G/Y/R/B/O NT_006204AC096897940866153        
S/G/Y/R/B/O NT_006204AC114787941643791AFM284YD1499.204100.751AC074124, AC074124, AC114787, AP001942
S/G/Y/R/B/O NT_006204AC074124942419673        
S/G/Y/R/B/O NT_006204AC110796942976951        
S/G/Y/R/B/O NT_006204AC079301944243473AFM196XF4499.204100.751 AC079301, AP001949


  NT_006204 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006204AC110774944584403AFM224XD6499.204100.751 AC110774, AP001949
S/G/Y/R/B/O NT_006204AC107049945711111        
S/G/Y/R/B/O NT_006204AC093810946838143        
S/G/Y/R/B/O NT_006204AC093847948304853        
S/G/Y/R/B/O NT_006204AC093597950034113        
S/G/Y/R/B/O NT_006204AC097520950186223        
S/G/Y/R/B/O NT_006204AC112695952197513AFMA058XB9499.204100.751 AC112695
S/G/Y/R/B/O NT_006204AC115537952979613        
S/G/Y/R/B/O NT_006204AC093596954854491GATA21G02  4100.752AC092744, AC018575, AC092744, AC093596, AP001944
S/G/Y/R/B/O NT_006204AC022317955030223GAAT1F09  4100.751 AP001944
S/G/Y/R/B/O NT_006204AC095059956716593        
S/G/Y/R/B/O NT_006204AC108158957792453        
S/G/Y/R/B/O NT_006204AC020699957875473        
S/G/Y/R/B/O NT_006204AC096769959725083        
S/G/Y/R/B/O NT_006204AC115111960413143        
S/G/Y/R/B/O NT_006204AC011660961405441        
S/G/Y/R/B/O NT_006204AC110800961732623        
S/G/Y/R/B/O NT_006204AC105452962610843        
S/G/Y/R/B/O NT_006204AC105315964157183        
S/G/Y/R/B/O NT_006204AC093733964315343        
S/G/Y/R/B/O NT_006204AC104077966050433        
S/G/Y/R/B/O NT_006204AC087413967251513        
S/G/Y/R/B/O NT_006204AC104647968038523        
S/G/Y/R/B/O NT_006204AC098677969497363AFM077YF11499.204100.751AC022249, AC022249, AC098677
S/G/Y/R/B/O NT_006204AC096746970657143        
S/G/Y/R/B/O NT_006204AC034182972227581        
S/G/Y/R/B/O NT_006204AC022249972300861        
S/G/Y/R/B/O NT_006204AC007715972435131        
S/G/Y/R/B/O NT_006204AC037468972493261        
S/G/Y/R/B/O NT_006204AP002083972549711