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Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006216
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006216AC093851732058841        
S/G/Y/R/B/O NT_006216AC019005734297511AFM191XH2478.10478.971AC096713, AC096713
S/G/Y/R/B/O NT_006216AC022863732137161        
S/G/Y/R/B/O NT_006216AC096713735368703AFM177XF8  478.971 AC096713
S/G/Y/R/B/O NT_006216AC096713735368703AFM177XF8477.40  1 AC096713
S/G/Y/R/B/O NT_006216AC110783735604533        
S/G/Y/R/B/O NT_006216AC079230735819343        
S/G/Y/R/B/O NT_006216AC110006737434792        
S/G/Y/R/B/O NT_006216AC019089737569723        
S/G/Y/R/B/O NT_006216AC024722740182413ATA22B11  479.691 AC024722, AC073514, AP002823, L10641
S/G/Y/R/B/O NT_006216AC068721740500623        
S/G/Y/R/B/O NT_006216AC106898742253441        
S/G/Y/R/B/O NT_006216AC106051743930071        
S/G/Y/R/B/O NT_006216AC095056744758923        
S/G/Y/R/B/O NT_006216AC093790746528853        
S/G/Y/R/B/O NT_006216AC104814748032443        
S/G/Y/R/B/O NT_006216AC110082749089983        
S/G/Y/R/B/O NT_006216AC096728749793803        
S/G/Y/R/B/O NT_006216AC093839750600763        
S/G/Y/R/B/O NT_006216AC095053752205983        
S/G/Y/R/B/O NT_006216AC105757753307213        
S/G/Y/R/B/O NT_006216AC053527753438703        
S/G/Y/R/B/O NT_006216AC108157757231963UT5137  482.091 AC008076, AC108157, AP002825, U51243
S/G/Y/R/B/O NT_006216AC110752757401213        
S/G/Y/R/B/O NT_006216AC074250758273853ATC5H03  478.432AL136327, AC074250, AL136327
S/G/Y/R/B/O NT_006216AC112518759447953        
S/G/Y/R/B/O NT_006216AC108029760212043        
S/G/Y/R/B/O NT_006216AC092438760893363        
S/G/Y/R/B/O NT_006216AC097709761550193        
S/G/Y/R/B/O NT_006216AC093677763137603        
S/G/Y/R/B/O NT_006216AC097470764614883        
S/G/Y/R/B/O NT_006216AC021180765701901        
S/G/Y/R/B/O NT_006216AC096858767421303        
S/G/Y/R/B/O NT_006216 - AFM022XC1  478.970AC093829, AC093829
S/G/Y/R/B/O NT_006216 - GC  479.691AC021016, AC021016