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Chromosome 4 - Genetic Maps - Single Contig
Line color code:
- White: no markers placed on this accession
- Blue: marker placement on STS map consistent with alignment of assembly contigs
- Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
- Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
- Red: marker placed on different chromosome in STS map
- Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
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Links | Contig | Accession | Chr Start | Phs | STS Marker | Gen Chr | Genethon | Marsh Chr | Marshfield | Plc | Other Accessions in Assembly | All Accessions |
S/G/Y/R/B/O |
NT_016354 | AC068474 | 120523090 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC105758 | 120528559 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC023119 | 120537405 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC093896 | 120721526 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC096760 | 120877146 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC097528 | 120974657 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC104087 | 121143069 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC092659 | 121151310 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC097378 | 121309833 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC096773 | 121467250 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC093772 | 121716060 | 3 | AFM336XH5 | 4 | 127.00 | 4 | 128.31 | 1 | AC015773, | AC015773, AC093772 |
S/G/Y/R/B/O |
NT_016354 | AC015773 | 121775143 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC015822 | 121785593 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC108148 | 121785754 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC105387 | 121892949 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC097462 | 121920997 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC110797 | 122099970 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC093591 | 122128166 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC107053 | 122286924 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC099340 | 122341981 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC108045 | 122440914 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC114735 | 122506331 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC104664 | 122717944 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC105919 | 122872543 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC093589 | 123009807 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC092629 | 123135570 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC098865 | 123282243 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC079835 | 123334591 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC108152 | 123499638 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC079856 | 123505914 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC093825 | 123659254 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC097472 | 123806645 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC105421 | 123951121 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC110618 | 124111913 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC097474 | 124188968 | 3 | AFMB320ZH5 | 4 | 125.10 | 4 | 126.71 | 1 |   | AC097474 |
S/G/Y/R/B/O |
NT_016354 | AC021007 | 124340577 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC068694 | 124340816 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC072025 | 124349666 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC108166 | 124382427 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC022489 | 124383790 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC053545 | 124776762 | 3 | AFM260ZA5 | 4 | 125.10 | 4 | 126.15 | 1 |   | AC053545 |
S/G/Y/R/B/O |
NT_016354 | AC093691 | 124854477 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC021205 | 125038649 | 3 | MFD146A |   |   | 4 | 126.15 | 1 | AC109357, | AC021205, AC109357 |
S/G/Y/R/B/O |
NT_016354 | AC109357 | 125086790 | 1 | GATA30B11 |   |   | 4 | 126.15 | 1 |   | AC109357 |
S/G/Y/R/B/O |
NT_016354 | AC097492 | 125186954 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC026402 | 125390050 | 3 | AFMB342XD1 | 4 | 125.10 | 4 | 126.15 | 1 |   | AC026402, AC098585 |
S/G/Y/R/B/O |
NT_016354 | AC026402 | 125464045 | 3 | UT1467 |   |   | 4 | 126.15 | 1 |   | AC025511 |
S/G/Y/R/B/O |
NT_016354 | AC093821 | 125559293 | 3 | ATA26F08 |   |   | 4 | 126.71 | 1 |   | AC025511, AC093821 |
S/G/Y/R/B/O |
NT_016354 | AC092543 | 125627954 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC096732 | 125685879 | 3 |   |   |   |   |   |   |   |   |
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Links | Contig | Accession | Chr Start | Phs | STS Marker | Gen Chr | Genethon | Marsh Chr | Marshfield | Plc | Other Accessions in Assembly | All Accessions |
S/G/Y/R/B/O |
NT_016354 | AC093767 | 125868690 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC108075 | 126016195 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC107061 | 126181986 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC009616 | 126290545 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 | AC012655 | 126299791 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_016354 |   | - |   | UT1337 |   |   | 4 | 123.13 | 1 | AC106892, | AC106892 |
S/G/Y/R/B/O |
NT_016354 |   | - |   | AFM249VE1 | 4 | 123.50 | 4 | 124.45 | 1 | AC024094, | AC024094, AC093651 |
S/G/Y/R/B/O |
NT_016354 |   | - |   | AFM319ZC1 | 4 | 123.50 | 4 | 124.45 | 1 | AC093816, | AC093816 |
S/G/Y/R/B/O |
NT_016354 |   | - |   | AFMA046YG1 | 4 | 123.50 | 4 | 124.45 | 1 | AC024350, AC110079, | AC024350, AC110079 |
S/G/Y/R/B/O |
NT_016354 |   | - |   | AFM151XC3 | 4 | 123.50 | 4 | 124.45 | 1 | AC092656, AC108164, | AC092656, AC108164 |
S/G/Y/R/B/O |
NT_016354 |   | - |   | UT7161 |   |   | 4 | 126.15 | 0 |   |   |
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