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  Chromosome 4 - Genetic Maps - Single Contig
 

Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_016354
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0684741205230901        
S/G/Y/R/B/O NT_016354AC1057581205285591        
S/G/Y/R/B/O NT_016354AC0231191205374053        
S/G/Y/R/B/O NT_016354AC0938961207215263        
S/G/Y/R/B/O NT_016354AC0967601208771463        
S/G/Y/R/B/O NT_016354AC0975281209746573        
S/G/Y/R/B/O NT_016354AC1040871211430693        
S/G/Y/R/B/O NT_016354AC0926591211513103        
S/G/Y/R/B/O NT_016354AC0973781213098333        
S/G/Y/R/B/O NT_016354AC0967731214672503        
S/G/Y/R/B/O NT_016354AC0937721217160603AFM336XH54127.004128.311AC015773, AC015773, AC093772
S/G/Y/R/B/O NT_016354AC0157731217751431        
S/G/Y/R/B/O NT_016354AC0158221217855931        
S/G/Y/R/B/O NT_016354AC1081481217857541        
S/G/Y/R/B/O NT_016354AC1053871218929493        
S/G/Y/R/B/O NT_016354AC0974621219209973        
S/G/Y/R/B/O NT_016354AC1107971220999701        
S/G/Y/R/B/O NT_016354AC0935911221281663        
S/G/Y/R/B/O NT_016354AC1070531222869243        
S/G/Y/R/B/O NT_016354AC0993401223419811        
S/G/Y/R/B/O NT_016354AC1080451224409141        
S/G/Y/R/B/O NT_016354AC1147351225063311        
S/G/Y/R/B/O NT_016354AC1046641227179443        
S/G/Y/R/B/O NT_016354AC1059191228725431        
S/G/Y/R/B/O NT_016354AC0935891230098073        
S/G/Y/R/B/O NT_016354AC0926291231355703        
S/G/Y/R/B/O NT_016354AC0988651232822433        
S/G/Y/R/B/O NT_016354AC0798351233345913        
S/G/Y/R/B/O NT_016354AC1081521234996381        
S/G/Y/R/B/O NT_016354AC0798561235059143        
S/G/Y/R/B/O NT_016354AC0938251236592543        
S/G/Y/R/B/O NT_016354AC0974721238066453        
S/G/Y/R/B/O NT_016354AC1054211239511213        
S/G/Y/R/B/O NT_016354AC1106181241119133        
S/G/Y/R/B/O NT_016354AC0974741241889683AFMB320ZH54125.104126.711 AC097474
S/G/Y/R/B/O NT_016354AC0210071243405771        
S/G/Y/R/B/O NT_016354AC0686941243408161        
S/G/Y/R/B/O NT_016354AC0720251243496661        
S/G/Y/R/B/O NT_016354AC1081661243824271        
S/G/Y/R/B/O NT_016354AC0224891243837903        
S/G/Y/R/B/O NT_016354AC0535451247767623AFM260ZA54125.104126.151 AC053545
S/G/Y/R/B/O NT_016354AC0936911248544773        
S/G/Y/R/B/O NT_016354AC0212051250386493MFD146A  4126.151AC109357, AC021205, AC109357
S/G/Y/R/B/O NT_016354AC1093571250867901GATA30B11  4126.151 AC109357
S/G/Y/R/B/O NT_016354AC0974921251869543        
S/G/Y/R/B/O NT_016354AC0264021253900503AFMB342XD14125.104126.151 AC026402, AC098585
S/G/Y/R/B/O NT_016354AC0264021254640453UT1467  4126.151 AC025511
S/G/Y/R/B/O NT_016354AC0938211255592933ATA26F08  4126.711 AC025511, AC093821
S/G/Y/R/B/O NT_016354AC0925431256279543        
S/G/Y/R/B/O NT_016354AC0967321256858793        


  NT_016354 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0937671258686903        
S/G/Y/R/B/O NT_016354AC1080751260161953        
S/G/Y/R/B/O NT_016354AC1070611261819861        
S/G/Y/R/B/O NT_016354AC0096161262905451        
S/G/Y/R/B/O NT_016354AC0126551262997911        
S/G/Y/R/B/O NT_016354 - UT1337  4123.131AC106892, AC106892
S/G/Y/R/B/O NT_016354 - AFM249VE14123.504124.451AC024094, AC024094, AC093651
S/G/Y/R/B/O NT_016354 - AFM319ZC14123.504124.451AC093816, AC093816
S/G/Y/R/B/O NT_016354 - AFMA046YG14123.504124.451AC024350, AC110079, AC024350, AC110079
S/G/Y/R/B/O NT_016354 - AFM151XC34123.504124.451AC092656, AC108164, AC092656, AC108164
S/G/Y/R/B/O NT_016354 - UT7161  4126.150