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Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006258
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006258AC0243641475595141        
S/G/Y/R/B/O NT_006258AC0483781475705591AFMA286XH5  4142.241 AC048378
S/G/Y/R/B/O NT_006258AC0483781475705591AFMA286XH54141.40  1 AC048378
S/G/Y/R/B/O NT_006258AC0483781475710161AFMB297XA5  4142.241 AC048378
S/G/Y/R/B/O NT_006258AC0483781475710161AFMB297XA54141.40  1 AC048378
S/G/Y/R/B/O NT_006258AC0095871475799091GATA107  4145.981 AC009587
S/G/Y/R/B/O NT_006258AC1080601477455953        
S/G/Y/R/B/O NT_006258AC0233501478695481        
S/G/Y/R/B/O NT_006258AC0938601478717323        
S/G/Y/R/B/O NT_006258AC1080771481248843AFMA103YC14145.304145.981 AC108077
S/G/Y/R/B/O NT_006258AC0974761481661613        
S/G/Y/R/B/O NT_006258AC0967741483240133        
S/G/Y/R/B/O NT_006258AC0685181485024511        
S/G/Y/R/B/O NT_006258AC0157441485058651        
S/G/Y/R/B/O NT_006258AC1040671486088323        
S/G/Y/R/B/O NT_006258AC0975041489152753AFM225XB10  4144.561 AC097504
S/G/Y/R/B/O NT_006258AC0975041489152753AFM225XB104143.80  1 AC097504
S/G/Y/R/B/O NT_006258AC1072201489295283        
S/G/Y/R/B/O NT_006258AC0939051489949203        
S/G/Y/R/B/O NT_006258AC0974751492522493MFD140A  4143.311 AC097475
S/G/Y/R/B/O NT_006258AC0974751492523733AFM261ZG5  4143.841 AC097475
S/G/Y/R/B/O NT_006258AC0974751492523733AFM261ZG54143.10  1 AC097475
S/G/Y/R/B/O NT_006258AC0967331493614593GATA11E09  4143.311 AC096733
S/G/Y/R/B/O NT_006258AC1080191496075573UT2147  4143.311AC025490, AC025490, AC108019
S/G/Y/R/B/O NT_006258AC1080191496237813AFM211ZC7  4142.771AC025490, AC025490, AC108019
S/G/Y/R/B/O NT_006258AC1080191496237813AFM211ZC74142.00  1AC025490, AC025490, AC108019
S/G/Y/R/B/O NT_006258AC0936711496348523        
S/G/Y/R/B/O NT_006258AC1095911497971571        
S/G/Y/R/B/O NT_006258AC1147711498436791        
S/G/Y/R/B/O NT_006258AC0254901499042241        
S/G/Y/R/B/O NT_006258AC0692721499065793        
S/G/Y/R/B/O NT_006258AC1068891500669381        
S/G/Y/R/B/O NT_006258AC1046911501246381        
S/G/Y/R/B/O NT_006258AC0938811502476663        
S/G/Y/R/B/O NT_006258AC1081431503876131        
S/G/Y/R/B/O NT_006258AC1166461504273631        
S/G/Y/R/B/O NT_006258AC0265531504910262        
S/G/Y/R/B/O NT_006258AC0936481506225323        
S/G/Y/R/B/O NT_006258AC0024601507072933        
S/G/Y/R/B/O NT_006258AC1081561508802453        
S/G/Y/R/B/O NT_006258AC0938081509666061        
S/G/Y/R/B/O NT_006258AC0974651512411053AFM294VH54152.504152.981AC108168, AC091025, AC097465, AC108168
S/G/Y/R/B/O NT_006258AC1081681513092141AFMB292XB54153.004152.981AC027058, AC027058, AC091025, AC108168
S/G/Y/R/B/O NT_006258AC0270581513229613        
S/G/Y/R/B/O NT_006258AC1089321514476681        
S/G/Y/R/B/O NT_006258AC0938931515684593AFMA109XF54153.004152.981 AC093893
S/G/Y/R/B/O NT_006258AC0967561516635713        
S/G/Y/R/B/O NT_006258AC1111911518125891        
S/G/Y/R/B/O NT_006258AC1053431519088203        
S/G/Y/R/B/O NT_006258 - GATA135E06  4143.310  


  NT_006258 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006258 - AFM304WB9  4145.981AC111001, AC112232, AC027460, AC111001, AC112232
S/G/Y/R/B/O NT_006258 - AFM031XA7  4145.981AC013782, AC093885, AC013782, AC093885
S/G/Y/R/B/O NT_006258 - AFM242YE9  4145.981AC015823, AC093885, AC015823, AC093885
S/G/Y/R/B/O NT_006258 - AFMB361ZG5  4145.981AC051645, AC098588, AC024423, AC051645, AC098588
S/G/Y/R/B/O NT_006258 - AFMB336ZA9  4145.981AC097658, AC104685, AC097658, AC104685
S/G/Y/R/B/O NT_006258 - AFM318XG9  4145.980  
S/G/Y/R/B/O NT_006258 - AFM337XE94146.404147.061AC012204, AC115621, AC012204, AC115621
S/G/Y/R/B/O NT_006258 - AFM288VB94146.404147.061AC104791, AC104791