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  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007299
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007299AL049697999947163ATA1F12  692.851 AL049697
S/G/Y/R/B/O NT_007299AL4511261000896963        
S/G/Y/R/B/O NT_007299AL1332111001962963        
S/G/Y/R/B/O NT_007299AL3569701002786823        
S/G/Y/R/B/O NT_007299AL1389191003491473AFMA312ZB1693.20692.851 AL138919
S/G/Y/R/B/O NT_007299AL5903921004041013        
S/G/Y/R/B/O NT_007299AL1219421005061123        
S/G/Y/R/B/O NT_007299AL1387231005880213        
S/G/Y/R/B/O NT_007299AL1360961005916033        
S/G/Y/R/B/O NT_007299AL1218351007037153        
S/G/Y/R/B/O NT_007299AL1390421008203063        
S/G/Y/R/B/O NT_007299AL1387191009279513        
S/G/Y/R/B/O NT_007299AL1390901009280453        
S/G/Y/R/B/O NT_007299AL1357791010564133        
S/G/Y/R/B/O NT_007299AL1334081011304933        
S/G/Y/R/B/O NT_007299AL1604031012489653        
S/G/Y/R/B/O NT_007299AL0968681012629953        
S/G/Y/R/B/O NT_007299AL4455301014146563        
S/G/Y/R/B/O NT_007299AL0793421015650703AFMB321ZB1696.10696.051 AL079342
S/G/Y/R/B/O NT_007299AL3531351016186613        
S/G/Y/R/B/O NT_007299AL3536591017462143        
S/G/Y/R/B/O NT_007299AL1218331017800643        
S/G/Y/R/B/O NT_007299AL1398041018764873        
S/G/Y/R/B/O NT_007299AL1387171018784013        
S/G/Y/R/B/O NT_007299AL1369711019826103        
S/G/Y/R/B/O NT_007299AL1591741020651103        
S/G/Y/R/B/O NT_007299AL0966781021563903        
S/G/Y/R/B/O NT_007299AL1588131022945193        
S/G/Y/R/B/O NT_007299AL3536921024327093AFMB031YE9697.10697.111 AL353692
S/G/Y/R/B/O NT_007299AL1217871024885873        
S/G/Y/R/B/O NT_007299AL1581361025950433        
S/G/Y/R/B/O NT_007299AL1173421026236833        
S/G/Y/R/B/O NT_007299AL1219411027656383AFM317ZB1699.00699.011 AC027156, AL121941
S/G/Y/R/B/O NT_007299AL1591641027824503        
S/G/Y/R/B/O NT_007299AL5906411028448143        
S/G/Y/R/B/O NT_007299AL1329961028455903        
S/G/Y/R/B/O NT_007299AL5910521029445153        
S/G/Y/R/B/O NT_007299AL3915591030310583AFMA223WD9699.00699.011 AL391559
S/G/Y/R/B/O NT_007299AL1219641030317933        
S/G/Y/R/B/O NT_007299AL1218371031326873        
S/G/Y/R/B/O NT_007299AL1359181032189853        
S/G/Y/R/B/O NT_007299AL4452081033296013        
S/G/Y/R/B/O NT_007299AL3653351033902433        
S/G/Y/R/B/O NT_007299AL6631121035510243        
S/G/Y/R/B/O NT_007299AL6070791035791983        
S/G/Y/R/B/O NT_007299AL4493431037217673        
S/G/Y/R/B/O NT_007299AL0802841038585683AFM297ZD56100.906100.911 AC027194
S/G/Y/R/B/O NT_007299AL0802841038774653AFMB296XH16100.90699.011 AC027194, AL080284
S/G/Y/R/B/O NT_007299AL5126001039839043        
S/G/Y/R/B/O NT_007299AL3553511041249763        


  NT_007299 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007299AL1327661042869943GATA30A08  6100.911 AL132766, AL358935
S/G/Y/R/B/O NT_007299AL5906351044062623AFM311WA56100.906100.911AL592428, AC026043, AL592428
S/G/Y/R/B/O NT_007299AL5924281044873553AFM278YD16101.606101.551 AC026043, AL592428
S/G/Y/R/B/O NT_007299AL5924281044911623AFM212ZF106101.606101.551AL603903, AC026043, AL592428, AL603903
S/G/Y/R/B/O NT_007299AL6039031044923513        
S/G/Y/R/B/O NT_007299AL5908141045280843        
S/G/Y/R/B/O NT_007299AL6037511046886243        
S/G/Y/R/B/O NT_007299AL5961791047200973        
S/G/Y/R/B/O NT_007299AL1334571049020523AFM158YA116101.606102.811 AC009924, AL133457
S/G/Y/R/B/O NT_007299AL5913041049707273        
S/G/Y/R/B/O NT_007299AL5908691050056403        
S/G/Y/R/B/O NT_007299AL5902301050057343        
S/G/Y/R/B/O NT_007299AL1602651050748503        
S/G/Y/R/B/O NT_007299AL3599871051321443MFD171  6102.181 AC087896, AL359987
S/G/Y/R/B/O NT_007299AL3599871052436033GATA74B03  6101.552 AC021418, AL359987, AL450123
S/G/Y/R/B/O NT_007299AL5899471052664493        
S/G/Y/R/B/O NT_007299AL3569561054100643        
S/G/Y/R/B/O NT_007299AL1387311056042283        
S/G/Y/R/B/O NT_007299AL3548571056764403        
S/G/Y/R/B/O NT_007299AL5910361058755633        
S/G/Y/R/B/O NT_007299AL1219661059346153GATA68H04  6102.811 AC009425, AC025054
S/G/Y/R/B/O NT_007299AL5915191060687263MFD284  6102.181 AL591519
S/G/Y/R/B/O NT_007299AL5903051061340273        
S/G/Y/R/B/O NT_007299AL3560941063301883GATA52B08  6102.811 AL356094
S/G/Y/R/B/O NT_007299AL3913361063759743        
S/G/Y/R/B/O NT_007299AL5922171064942053        
S/G/Y/R/B/O NT_007299AL3569711066014483AFM218XG16103.506103.451 AL356971
S/G/Y/R/B/O NT_007299AL1573781066788413        
S/G/Y/R/B/O NT_007299AL1392331067717263        
S/G/Y/R/B/O NT_007299AL0785951069216973AFMA099YH56103.506103.451 AL078595
S/G/Y/R/B/O NT_007299AL1359131070014023        
S/G/Y/R/B/O NT_007299AL1217241070790383GATA68D05  6104.081 AL121724
S/G/Y/R/B/O NT_007299AL1217241071282073AFM191XD46104.806102.811 AL121724
S/G/Y/R/B/O NT_007299AL5131861071588523        
S/G/Y/R/B/O NT_007299AL5906701072490183GATA108  6104.081 AL590670
S/G/Y/R/B/O NT_007299AL3652271073560573AFM234YA76103.506104.081 AC025601
S/G/Y/R/B/O NT_007299AL0314461073664333        
S/G/Y/R/B/O NT_007299AL1359061074784133        
S/G/Y/R/B/O NT_007299 - AFMA054TG16100.90  0