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  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_023399
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023399AL591073885100983        
S/G/Y/R/B/O NT_023399AL591030886780723        
S/G/Y/R/B/O NT_023399AL590426889422423ATA28B11  688.631 AC021845, AL590426
S/G/Y/R/B/O NT_023399AL590663889952523        
S/G/Y/R/B/O NT_023399AL355612890502063        
S/G/Y/R/B/O NT_023399AL133460892125803        
S/G/Y/R/B/O NT_023399AL035466893128643AFMB285ZF5689.40689.231 AL035466
S/G/Y/R/B/O NT_023399AL603648893271293        
S/G/Y/R/B/O NT_023399AL603833893786983        
S/G/Y/R/B/O NT_023399AL365222894168093        
S/G/Y/R/B/O NT_023399AL049595895810533        
S/G/Y/R/B/O NT_023399AL390316896577353        
S/G/Y/R/B/O NT_023399AL591027897639763        
S/G/Y/R/B/O NT_023399AL603628898736113        
S/G/Y/R/B/O NT_023399AL590785899372023AFMA303ZF5689.40689.231 AC023074, AC055116, AL590785
S/G/Y/R/B/O NT_023399AL591500900617643        
S/G/Y/R/B/O NT_023399AL050340901202273        
S/G/Y/R/B/O NT_023399AL353663902464623        
S/G/Y/R/B/O NT_023399AL391843903236373        
S/G/Y/R/B/O NT_023399AL356969903715093        
S/G/Y/R/B/O NT_023399AL512404905405933        
S/G/Y/R/B/O NT_023399AL035468905806973        
S/G/Y/R/B/O NT_023399AL121962906744023        
S/G/Y/R/B/O NT_023399AL121718908261543AFM191XA3690.00689.831 AL121718
S/G/Y/R/B/O NT_023399AL391709908373473        
S/G/Y/R/B/O NT_023399AL133226909224453AFM198YC11690.00689.831 AL133226
S/G/Y/R/B/O NT_023399AL450327909607273        
S/G/Y/R/B/O NT_023399AL356776911330313        
S/G/Y/R/B/O NT_023399AL356374913014203        
S/G/Y/R/B/O NT_023399AL355796913225033        
S/G/Y/R/B/O NT_023399AL355379914744893        
S/G/Y/R/B/O NT_023399AL078601915406583        
S/G/Y/R/B/O NT_023399AL391840916375623        
S/G/Y/R/B/O NT_023399AL451064917471953        
S/G/Y/R/B/O NT_023399AL035700918317763AFM312YB9690.00689.831 AL035700, AL450316
S/G/Y/R/B/O NT_023399AL078462919070173        
S/G/Y/R/B/O NT_023399AL590241919954263        
S/G/Y/R/B/O NT_023399AL132875920074873        
S/G/Y/R/B/O NT_023399AL133475922284213ATA41H06  689.831 AL133475, AL159162
S/G/Y/R/B/O NT_023399AL591135922416143        
S/G/Y/R/B/O NT_023399AL391595922791793        
S/G/Y/R/B/O NT_023399AL049696923971463        
S/G/Y/R/B/O NT_023399AL359715925397533        
S/G/Y/R/B/O NT_023399AL596028926620323        
S/G/Y/R/B/O NT_023399AL590824927533353AFMA067YH5690.60690.431AC026880, AC026880, AL590824
S/G/Y/R/B/O NT_023399AL590035927691773        
S/G/Y/R/B/O NT_023399AL357892929668023GATA62E12  689.831 AL357892
S/G/Y/R/B/O NT_023399AL121930931870573UT7256  690.431AC016100, AC016100, AL121930
S/G/Y/R/B/O NT_023399AL137123932237783        
S/G/Y/R/B/O NT_023399AL365446932947153        


  NT_023399 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023399AC016100933162171        
S/G/Y/R/B/O NT_023399AC016012933271131        
S/G/Y/R/B/O NT_023399AL445303933681263AFM319VH5690.60690.431AC016012, AC016012, AL445303
S/G/Y/R/B/O NT_023399AL355352934857003MFD131A  690.431 AC016105, AL355352
S/G/Y/R/B/O NT_023399AL390057935556363        
S/G/Y/R/B/O NT_023399AL122017936758763AFM248YE9690.60689.831 AL122017
S/G/Y/R/B/O NT_023399AL359693937353673        
S/G/Y/R/B/O NT_023399AL078599939356853AFM286ZA5691.80691.341 AL078599, AL136316
S/G/Y/R/B/O NT_023399AL355294940138593        
S/G/Y/R/B/O NT_023399AL360157941147753        
S/G/Y/R/B/O NT_023399AL356492942906673        
S/G/Y/R/B/O NT_023399AL050333943310463        
S/G/Y/R/B/O NT_023399AL121977944447503        
S/G/Y/R/B/O NT_023399AL132670945665593        
S/G/Y/R/B/O NT_023399AL596184947084033        
S/G/Y/R/B/O NT_023399AL353661947723811        
S/G/Y/R/B/O NT_023399AC012132948213181        
S/G/Y/R/B/O NT_023399AC026880948226061        
S/G/Y/R/B/O NT_023399AC073142948278331        
S/G/Y/R/B/O NT_023399AC048371948332531        
S/G/Y/R/B/O NT_023399AL450333949285183        
S/G/Y/R/B/O NT_023399AL450482950854823        
S/G/Y/R/B/O NT_023399AL034377950968203        
S/G/Y/R/B/O NT_023399AL450483952007533        
S/G/Y/R/B/O NT_023399AL357121952618743        
S/G/Y/R/B/O NT_023399AL139333953138593        
S/G/Y/R/B/O NT_023399AL121716954103023        
S/G/Y/R/B/O NT_023399AL049699955265713UT896  690.431 AL390998
S/G/Y/R/B/O NT_023399AL049699955579413ATA10C06  689.231 AL049699, AL390998
S/G/Y/R/B/O NT_023399AL136970955901173        
S/G/Y/R/B/O NT_023399AL391416956340003        
S/G/Y/R/B/O NT_023399AL355577957592783        
S/G/Y/R/B/O NT_023399AL121939957726523        
S/G/Y/R/B/O NT_023399AL109915959652233AFMB022XG9692.40692.251 AC019158
S/G/Y/R/B/O NT_023399AL136972959990913        
S/G/Y/R/B/O NT_023399AL391281960501793        
S/G/Y/R/B/O NT_023399AL139232960547363        
S/G/Y/R/B/O NT_023399AL034347962091383AFMB307XF1692.40692.251 AL034347
S/G/Y/R/B/O NT_023399AL161621963092403        
S/G/Y/R/B/O NT_023399AL138742964058551        
S/G/Y/R/B/O NT_023399AL138728965244033        
S/G/Y/R/B/O NT_023399AL391815965513023        
S/G/Y/R/B/O NT_023399AL049550966124763        
S/G/Y/R/B/O NT_023399AL137010967169703        
S/G/Y/R/B/O NT_023399AL590823967463823        
S/G/Y/R/B/O NT_023399AL445932967754623        
S/G/Y/R/B/O NT_023399AL590143969870393AFMB291XG9693.20692.851 AL590143
S/G/Y/R/B/O NT_023399AL035694970119823        
S/G/Y/R/B/O NT_023399AL109941971630673GATA42A06  692.851 AL109941
S/G/Y/R/B/O NT_023399AL109941971642653AFM199ZF12693.20692.851 AL109941


  NT_023399 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023399AL136312972632833        
S/G/Y/R/B/O NT_023399AL136095973192113        
S/G/Y/R/B/O NT_023399AL139806973692443        
S/G/Y/R/B/O NT_023399AL122016975341223AFMB337WC5691.80692.851 AL122016, AL353758
S/G/Y/R/B/O NT_023399AL135903975751223        
S/G/Y/R/B/O NT_023399AL589666977452503        
S/G/Y/R/B/O NT_023399AL136082978741603        
S/G/Y/R/B/O NT_023399AL355615979483973        
S/G/Y/R/B/O NT_023399AL450338981247593        
S/G/Y/R/B/O NT_023399AL356601982738753        
S/G/Y/R/B/O NT_023399AL049545983649473        
S/G/Y/R/B/O NT_023399AL355354984689283        
S/G/Y/R/B/O NT_023399AL603964985218223        
S/G/Y/R/B/O NT_023399AL390125985468083        
S/G/Y/R/B/O NT_023399AL391417986855913        
S/G/Y/R/B/O NT_023399AL357272987749463        
S/G/Y/R/B/O NT_023399AL365189988677753        
S/G/Y/R/B/O NT_023399AL353133989652093        
S/G/Y/R/B/O NT_023399AL512327990906363        
S/G/Y/R/B/O NT_023399AL121717991000773        
S/G/Y/R/B/O NT_023399AL157777993035353ATA24H07  692.851 AL157777
S/G/Y/R/B/O NT_023399AL138827993285773        
S/G/Y/R/B/O NT_023399AL139274994093213        
S/G/Y/R/B/O NT_023399AL160258995727023        
S/G/Y/R/B/O NT_023399AL096817995893853        
S/G/Y/R/B/O NT_023399AC021687996912251