Home    Genome Browser    BLAT Search    Help
  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_023451
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023451AL5839631620576143        
S/G/Y/R/B/O NT_023451AL3588521621377603        
S/G/Y/R/B/O NT_023451AL3553121623318831UT5779  6151.421 AL355312
S/G/Y/R/B/O NT_023451AL5838351623374983        
S/G/Y/R/B/O NT_023451AL3554971623843393        
S/G/Y/R/B/O NT_023451AL1388901625996363        
S/G/Y/R/B/O NT_023451AL0967081626073583        
S/G/Y/R/B/O NT_023451AL3575611627143623        
S/G/Y/R/B/O NT_023451AL0310101627776183        
S/G/Y/R/B/O NT_023451AL4510611628846773        
S/G/Y/R/B/O NT_023451AL4503441629760803        
S/G/Y/R/B/O NT_023451AL4503391631327063AFMA046XA96153.506153.041 AL450339
S/G/Y/R/B/O NT_023451AL0350861631897773        
S/G/Y/R/B/O NT_023451AL0496941634241933UT1670  6153.041 AL049694
S/G/Y/R/B/O NT_023451AL1332601634548503        
S/G/Y/R/B/O NT_023451AL1387331636024643UT1448  6153.041 AL138733
S/G/Y/R/B/O NT_023451AL4510721636295383        
S/G/Y/R/B/O NT_023451AL3565351636343513        
S/G/Y/R/B/O NT_023451AL0333921637026763GATA2B06  6153.041 AL033392
S/G/Y/R/B/O NT_023451AL5904131637716473        
S/G/Y/R/B/O NT_023451AL5905431638745863        
S/G/Y/R/B/O NT_023451AL3594941639568023        
S/G/Y/R/B/O NT_023451AL0356951640691163        
S/G/Y/R/B/O NT_023451AL3563111641887533        
S/G/Y/R/B/O NT_023451AL5909931642559993        
S/G/Y/R/B/O NT_023451AL0498211644423123AFM268YF56154.806153.571 AL049821
S/G/Y/R/B/O NT_023451AL0785821645846653AFM220YC96154.806153.571 AL078582
S/G/Y/R/B/O NT_023451AL4504011645881843        
S/G/Y/R/B/O NT_023451AL1388321646147933GATA141G02  6153.571 AL138832
S/G/Y/R/B/O NT_023451AL3570811647358563        
S/G/Y/R/B/O NT_023451AL0495481648066413        
S/G/Y/R/B/O NT_023451AL5915071648930193        
S/G/Y/R/B/O NT_023451AL5899631649086053        
S/G/Y/R/B/O NT_023451AL1360791650798303GATA186B06  6154.102 AC022885, AL136079
S/G/Y/R/B/O NT_023451AL3909601650888703        
S/G/Y/R/B/O NT_023451AL1333561651934673AFM200YB66155.306154.101 AL133356
S/G/Y/R/B/O NT_023451AL1601621651989363        
S/G/Y/R/B/O NT_023451AL1332691652811653        
S/G/Y/R/B/O NT_023451AL0802761653717523        
S/G/Y/R/B/O NT_023451AL3567871654833753        
S/G/Y/R/B/O NT_023451AL3569631655280763        
S/G/Y/R/B/O NT_023451AL1219671656194453        
S/G/Y/R/B/O NT_023451AL5908671657112103        
S/G/Y/R/B/O NT_023451AL3581341657728313        
S/G/Y/R/B/O NT_023451AL1185171659233513AFM269ZE16155.306154.101 AC023863
S/G/Y/R/B/O NT_023451AL3914261659938973        
S/G/Y/R/B/O NT_023451AL6039081660215333        
S/G/Y/R/B/O NT_023451AL3913761661124293        
S/G/Y/R/B/O NT_023451AL1388881662452703GATA165G02  6154.641 AL138888
S/G/Y/R/B/O NT_023451AL1360941662470983        


  NT_023451 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023451AL3598501664036653        
S/G/Y/R/B/O NT_023451AL1364441664371013        
S/G/Y/R/B/O NT_023451AL1327741665333113        
S/G/Y/R/B/O NT_023451AL4452201666313163        
S/G/Y/R/B/O NT_023451AL0333761667526713AFM238YH106156.406155.171 AC073982
S/G/Y/R/B/O NT_023451AL5904011668211163        
S/G/Y/R/B/O NT_023451AL3570751668250883        
S/G/Y/R/B/O NT_023451AL5914191670034493        
S/G/Y/R/B/O NT_023451AL6271081670567723        
S/G/Y/R/B/O NT_023451AL5914991671780943AFM292YD56156.406155.171 AL590707, AL591499
S/G/Y/R/B/O NT_023451AL1369761671969393        
S/G/Y/R/B/O NT_023451AL1219521673548823AFMA133XA56156.406155.171 AL121952
S/G/Y/R/B/O NT_023451AL1362281674054143AFMA190XC16157.506156.241 AL136228
S/G/Y/R/B/O NT_023451AL5902841674497173        
S/G/Y/R/B/O NT_023451AL3553431675415463AFMA233WA56158.006156.771 AC023567, AL355343
S/G/Y/R/B/O NT_023451AL5962021676639413        
S/G/Y/R/B/O NT_023451AL1391011676882233        
S/G/Y/R/B/O NT_023451AL0317731678616433AFM277VF16158.506157.311 AL355359
S/G/Y/R/B/O NT_023451AL1334741678930703        
S/G/Y/R/B/O NT_023451AL5916031679951083        
S/G/Y/R/B/O NT_023451AL5124101680579832UT1073  6155.171 AL512410
S/G/Y/R/B/O NT_023451AL5124101680817632MFD312  6157.841 AL512410
S/G/Y/R/B/O NT_023451AL5124101681636032MFD226  6157.841 AC026098
S/G/Y/R/B/O NT_023451AL5125101682868113AFMA070XB96159.006157.841 AL512510
S/G/Y/R/B/O NT_023451AL5838611683591943        
S/G/Y/R/B/O NT_023451AL5896931684295501        
S/G/Y/R/B/O NT_023451AL5124541685927533        
S/G/Y/R/B/O NT_023451AL5132641686923693        
S/G/Y/R/B/O NT_023451AL5126581687822843        
S/G/Y/R/B/O NT_023451AL1580331689892643UT7908  6159.981 AC019199, AL512411
S/G/Y/R/B/O NT_023451AL3552971690839633AFMB302XH56160.706159.441 AL355297
S/G/Y/R/B/O NT_023451AL1625781692246873        
S/G/Y/R/B/O NT_023451AL1360911694074103        
S/G/Y/R/B/O NT_023451AL0498201694235523        
S/G/Y/R/B/O NT_023451AL5915451696109593        
S/G/Y/R/B/O NT_023451AC0217451696502701        
S/G/Y/R/B/O NT_023451 - UT622  6155.170