Home    Genome Browser    BLAT Search    Help
  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_030710
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030710AL6456411354120583        
S/G/Y/R/B/O NT_030710AL5914281354442383        
S/G/Y/R/B/O NT_030710AL6039021355842503        
S/G/Y/R/B/O NT_030710AL6039111357402743        
S/G/Y/R/B/O NT_030710AL3573521357740683        
S/G/Y/R/B/O NT_030710AL4452591358786693        
S/G/Y/R/B/O NT_030710AL1332571360132563        
S/G/Y/R/B/O NT_030710AL4503511361439013        
S/G/Y/R/B/O NT_030710AL3549361361895423UT5128  6121.971 AC021410
S/G/Y/R/B/O NT_030710AL4503431363290793        
S/G/Y/R/B/O NT_030710AL0356921363511843        
S/G/Y/R/B/O NT_030710AL5123761364358483        
S/G/Y/R/B/O NT_030710AL1098421364833133        
S/G/Y/R/B/O NT_030710AL1360811366042113        
S/G/Y/R/B/O NT_030710AL4511831367039613        
S/G/Y/R/B/O NT_030710AL1219681367060063        
S/G/Y/R/B/O NT_030710AL1361071368301253        
S/G/Y/R/B/O NT_030710AL4511351369039113        
S/G/Y/R/B/O NT_030710AL3562781369125833        
S/G/Y/R/B/O NT_030710AL3566051372228663AFMB316ZE16124.206124.111 AL356605
S/G/Y/R/B/O NT_030710AL3566051372412103AFM199ZH106124.206125.711 AL356605
S/G/Y/R/B/O NT_030710AL1362241372643863        
S/G/Y/R/B/O NT_030710AL3552961373329263        
S/G/Y/R/B/O NT_030710AL1361281375347193AFMA060ZF96124.906124.641 AL136128
S/G/Y/R/B/O NT_030710AL1219381376418113        
S/G/Y/R/B/O NT_030710AL3596761377977653        
S/G/Y/R/B/O NT_030710AL4503321378811443ATA22D10  6125.711 AL450332
S/G/Y/R/B/O NT_030710AL4503321379325333AFMA082XD56126.006125.711 AL450332
S/G/Y/R/B/O NT_030710AL3652591380128433        
S/G/Y/R/B/O NT_030710AL3899191381193503        
S/G/Y/R/B/O NT_030710AL0785941381465043        
S/G/Y/R/B/O NT_030710AL1361631383112123        
S/G/Y/R/B/O NT_030710AL0356891383905513        
S/G/Y/R/B/O NT_030710AL3911151385348153        
S/G/Y/R/B/O NT_030710AL1625801387107903GATA28G05  6125.711AC020559, AC020559, AL162580
S/G/Y/R/B/O NT_030710AC0205591387310133        
S/G/Y/R/B/O NT_030710AL3565341388312433        
S/G/Y/R/B/O NT_030710AL4503471390000573        
S/G/Y/R/B/O NT_030710AL3595351390773503        
S/G/Y/R/B/O NT_030710AL1371831391159893        
S/G/Y/R/B/O NT_030710AL0356031391441563        
S/G/Y/R/B/O NT_030710AL3900551392824983        
S/G/Y/R/B/O NT_030710AL3548581393297213        
S/G/Y/R/B/O NT_030710AL5907911394849793        
S/G/Y/R/B/O NT_030710AL0317761394875443        
S/G/Y/R/B/O NT_030710AL5907331395956523        
S/G/Y/R/B/O NT_030710AL1099391397291593        
S/G/Y/R/B/O NT_030710AL5900021398427423        
S/G/Y/R/B/O NT_030710AL0967111398975073        
S/G/Y/R/B/O NT_030710AL5838061399811163        


  NT_030710 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030710AL5922911400951163        
S/G/Y/R/B/O NT_030710AL3564321401182033        
S/G/Y/R/B/O NT_030710AL3652241402863393        
S/G/Y/R/B/O NT_030710AL0354701403527553        
S/G/Y/R/B/O NT_030710AC0165321404328751