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  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_019424
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019424AC0682361075676571        
S/G/Y/R/B/O NT_019424AC0157601076213211        
S/G/Y/R/B/O NT_019424AC0801751077349822        
S/G/Y/R/B/O NT_019424AC0215951078809691        
S/G/Y/R/B/O NT_019424AL6718841078923463        
S/G/Y/R/B/O NT_019424AL6070771079976183        
S/G/Y/R/B/O NT_019424AL3907891081710843        
S/G/Y/R/B/O NT_019424AL0343481082964213        
S/G/Y/R/B/O NT_019424AL1391081084168353        
S/G/Y/R/B/O NT_019424AL5124471084472793        
S/G/Y/R/B/O NT_019424AL5124061085492653        
S/G/Y/R/B/O NT_019424AL4996261086294123        
S/G/Y/R/B/O NT_019424AL0213671087440143GATA27C07  6104.081 AL021367
S/G/Y/R/B/O NT_019424AL0213671087782073AFM345YC56109.206109.191 AL021367
S/G/Y/R/B/O NT_019424AL5904041088122193        
S/G/Y/R/B/O NT_019424AL1327761089191573        
S/G/Y/R/B/O NT_019424AL3551431090118743        
S/G/Y/R/B/O NT_019424AL0333791090743543        
S/G/Y/R/B/O NT_019424AL1599851091820153        
S/G/Y/R/B/O NT_019424AL0333751092964353        
S/G/Y/R/B/O NT_019424AL3569581094471243        
S/G/Y/R/B/O NT_019424AL0236561094738783        
S/G/Y/R/B/O NT_019424AL5904841095861393        
S/G/Y/R/B/O NT_019424AL3536791096512793        
S/G/Y/R/B/O NT_019424Z847191097653083GATA5C03  6104.081 AC021806, Z84719
S/G/Y/R/B/O NT_019424AL3588731098752003        
S/G/Y/R/B/O NT_019424AL5962081100515883MFD97  6104.711 AL590862, AL596208
S/G/Y/R/B/O NT_019424AL0803161100790253        
S/G/Y/R/B/O NT_019424AL3571241101821623        
S/G/Y/R/B/O NT_019424AL5902391103021013        
S/G/Y/R/B/O NT_019424AL5911021104293173        
S/G/Y/R/B/O NT_019424AL5907271105453273AFM015XB3  6104.081 AL590727
S/G/Y/R/B/O NT_019424AL5907271105453273AFM015XB36104.70  1 AL590727
S/G/Y/R/B/O NT_019424AL5897401106488692GGAA23B02  6104.711 AC018703, AC031982, AL589740
S/G/Y/R/B/O NT_019424AL5897401106777202AFMA083YB96104.906104.711 AC018703, AC031982, AL589740
S/G/Y/R/B/O NT_019424AL6070711107866943        
S/G/Y/R/B/O NT_019424Z844821108567003        
S/G/Y/R/B/O NT_019424AL5903951109402903        
S/G/Y/R/B/O NT_019424AL5898261110949373        
S/G/Y/R/B/O NT_019424AL0223951112129343        
S/G/Y/R/B/O NT_019424AL0786031113397163        
S/G/Y/R/B/O NT_019424AL5900221114899713        
S/G/Y/R/B/O NT_019424AL5918031116067023AFM119YB66107.206107.251 AL591803
S/G/Y/R/B/O NT_019424AL0343711116713633AFM164YC116108.006107.881 AL034371
S/G/Y/R/B/O NT_019424AL5135501117363483        
S/G/Y/R/B/O NT_019424AL1377841118641533        
S/G/Y/R/B/O NT_019424AL0350871119914663        
S/G/Y/R/B/O NT_019424AL3909591121113163        
S/G/Y/R/B/O NT_019424AL5907251122164553        
S/G/Y/R/B/O NT_019424AL6039091123943423        


  NT_019424 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019424AL5907321123958433        
S/G/Y/R/B/O NT_019424AL0802851124891043AFM288VG56108.006107.881 AL080285
S/G/Y/R/B/O NT_019424AL0802851125377413GATA44  6107.251 AL080285
S/G/Y/R/B/O NT_019424AL5838221126356383        
S/G/Y/R/B/O NT_019424AL1219481127621523        
S/G/Y/R/B/O NT_019424Z860621127820793        
S/G/Y/R/B/O NT_019424AL5132071129589113        
S/G/Y/R/B/O NT_019424AL1219651129702933        
S/G/Y/R/B/O NT_019424AL5915851130832153        
S/G/Y/R/B/O NT_019424AL3561221131231083        
S/G/Y/R/B/O NT_019424AL1333381132860573GATA136F05  6107.881 AL133338, AL356434
S/G/Y/R/B/O NT_019424AL1617201133141773        
S/G/Y/R/B/O NT_019424AL1099341133405273        
S/G/Y/R/B/O NT_019424AL4504271134907393GGAA19D05  6107.251 AL450427
S/G/Y/R/B/O NT_019424AL1604041135045153        
S/G/Y/R/B/O NT_019424AL3652761135640143AFM345VD96108.006107.881 AL365276
S/G/Y/R/B/O NT_019424AP0025281137374463AFM158YA96108.006107.881 AB041511, AC023579, AL356861, AP002528
S/G/Y/R/B/O NT_019424AP0025281139008113AFMA111ZF56108.006107.881 AB041731, AC013311, AL109919, AP002528
S/G/Y/R/B/O NT_019424AP0025291140568203AFM296ZE56109.206109.191 AB042031, AL356438, AP002529
S/G/Y/R/B/O NT_019424AP0025291142037733AFMB320VC96109.206109.191 AL359174
S/G/Y/R/B/O NT_019424AP0025301142923733AFMA070ZD96109.206109.191 AL359174
S/G/Y/R/B/O NT_019424AP0025301142934853AFM190YF106109.206109.191 AL359174
S/G/Y/R/B/O NT_019424AP0025301143572293GATA164H01  6109.191 AB042030, AL355532, AP002530
S/G/Y/R/B/O NT_019424AP0025301143696843AFM123YA76109.206109.191 AB042030, AL355532, AP002530
S/G/Y/R/B/O NT_019424AP0025301144507853ATA22H10  6112.201 AB041340, AL355532, AP002530
S/G/Y/R/B/O NT_019424AP0025311145107133        
S/G/Y/R/B/O NT_019424AL5922981146676913        
S/G/Y/R/B/O NT_019424AL3571391147142913        
S/G/Y/R/B/O NT_019424AL3575061148407133        
S/G/Y/R/B/O NT_019424 - AFMA054TG1  6104.710