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  Chromosome 6 - Genetic Maps - Single Contig
 

Chromosome 6 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007422
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007422AC0108931730033681        
S/G/Y/R/B/O NT_007422AL5960891730754221AFMA244XC96166.606166.391 AL596089
S/G/Y/R/B/O NT_007422AL1099331731223733        
S/G/Y/R/B/O NT_007422AL3916631732859723        
S/G/Y/R/B/O NT_007422AL3913611733062183        
S/G/Y/R/B/O NT_007422AL1393931734052803        
S/G/Y/R/B/O NT_007422AL5964521734908043        
S/G/Y/R/B/O NT_007422AL5910451735584863        
S/G/Y/R/B/O NT_007422AL1099421735838393        
S/G/Y/R/B/O NT_007422AL1329821737580563        
S/G/Y/R/B/O NT_007422AL4452151738477943        
S/G/Y/R/B/O NT_007422AL1387161739043873        
S/G/Y/R/B/O NT_007422AL0356971739696833AFMA141ZD96166.606166.391 AL035697
S/G/Y/R/B/O NT_007422AL0356971740827433AFM207WA16166.606166.391 AL035697
S/G/Y/R/B/O NT_007422AL0785831740942863        
S/G/Y/R/B/O NT_007422AP0036991742464823AFM242ZG56166.606166.391AP000886, AP000886, AP003699
S/G/Y/R/B/O NT_007422AP0008861742902023        
S/G/Y/R/B/O NT_007422AP0020911744625573        
S/G/Y/R/B/O NT_007422AP0015771745949203UT1349  6167.781 AP001577
S/G/Y/R/B/O NT_007422AP0015781747079283UT681  6167.781 AP001578
S/G/Y/R/B/O NT_007422AL0086311748909003AFMA342VB56170.206169.951 AL008631
S/G/Y/R/B/O NT_007422AP0008871749350563        
S/G/Y/R/B/O NT_007422AP0008881750302903        
S/G/Y/R/B/O NT_007422AP0015761751205473        
S/G/Y/R/B/O NT_007422AL6037881752013383        
S/G/Y/R/B/O NT_007422AL3549421752292193        
S/G/Y/R/B/O NT_007422AL5902861754254363        
S/G/Y/R/B/O NT_007422AL1371821754891923        
S/G/Y/R/B/O NT_007422AL0785851756081803        
S/G/Y/R/B/O NT_007422AL0311211756774613        
S/G/Y/R/B/O NT_007422AL3561191758652653        
S/G/Y/R/B/O NT_007422AL0317811759384173        
S/G/Y/R/B/O NT_007422AL4453071760552363        
S/G/Y/R/B/O NT_007422AL1363141760816143        
S/G/Y/R/B/O NT_007422AL1370051761700713        
S/G/Y/R/B/O NT_007422AL4511281762736503        
S/G/Y/R/B/O NT_007422AL0786021763490263GATA81B01  6173.311 AL078602
S/G/Y/R/B/O NT_007422AL1362251764280463        
S/G/Y/R/B/O NT_007422AL1185181764701133        
S/G/Y/R/B/O NT_007422Z972051765379823        
S/G/Y/R/B/O NT_007422AL1391901766867333        
S/G/Y/R/B/O NT_007422AL3589721767969533GATA65D12  6173.311 AL358972
S/G/Y/R/B/O NT_007422AL5899521769072583        
S/G/Y/R/B/O NT_007422AL5130231769480513        
S/G/Y/R/B/O NT_007422AL5897271771136503        
S/G/Y/R/B/O NT_007422AL5961751771898893        
S/G/Y/R/B/O NT_007422AL4503451771946711        
S/G/Y/R/B/O NT_007422AL1335381773760133        
S/G/Y/R/B/O NT_007422AL0235791774851513        
S/G/Y/R/B/O NT_007422AL1361001775553863        


  NT_007422 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007422AL3561251777274983        
S/G/Y/R/B/O NT_007422AL1173451777597263        
S/G/Y/R/B/O NT_007422AL1361301779026983        
S/G/Y/R/B/O NT_007422AL1601601779722723        
S/G/Y/R/B/O NT_007422AL1217891781209683AFMA085ZD56177.906177.881 AL121789
S/G/Y/R/B/O NT_007422AL5919621781336553        
S/G/Y/R/B/O NT_007422AL5903021782185363        
S/G/Y/R/B/O NT_007422AL5904821783224343        
S/G/Y/R/B/O NT_007422AL1326611784176813        
S/G/Y/R/B/O NT_007422AL6274431785245403        
S/G/Y/R/B/O NT_007422AL1219561787604133AFM079ZB76179.106179.071 AL121956
S/G/Y/R/B/O NT_007422AL0220691788050253        
S/G/Y/R/B/O NT_007422Z980491789816153        
S/G/Y/R/B/O NT_007422AL0237751791615663AFMA290XH96181.806182.111 AL023775
S/G/Y/R/B/O NT_007422AL1591631792879083AFM212YF66181.806182.111 AF019664, AL159163
S/G/Y/R/B/O NT_007422AL1334581794017203        
S/G/Y/R/B/O NT_007422Z947211794330233        
S/G/Y/R/B/O NT_007422AL1219351795657133        
S/G/Y/R/B/O NT_007422AL3537471796668383        
S/G/Y/R/B/O NT_007422AL0213311797302913        
S/G/Y/R/B/O NT_007422AL5924441798953923AFMA057VF96181.806182.111 AL592444