Chromosome 1 - BAC End Pairs - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main BAC End Pairs Page
Whole Chromosome
Single Contigs
Line color code:
White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes
NT_077402
NT_077911
NT_077912
NT_034471
NT_077913
NT_077914
NT_077915
NT_077916
NT_004350
NT_004321
NT_004547
NT_077917
NT_077918
NT_077919
NT_028054
NT_021937
NT_077382
NT_004873
NT_077920
NT_030584
NT_077921
NT_004610
NT_004391
NT_077383
NT_077922
NT_077384
NT_037485
NT_077385
NT_004538
NT_077923
NT_004511
NT_077386
NT_004852
NT_032977
NT_004464
NT_077924
NT_034383
NT_077925
NT_077926
NT_004483
NT_037488
NT_004902
NT_026943
NT_004686
NT_077927
NT_021979
NT_034389
NT_077928
NT_028050
NT_030567
NT_029860
NT_077929
NT_019273
NT_004754
NT_077387
NT_022052
NT_022071
NT_077930
NT_077931
NT_077932
NT_077933
NT_004434
NT_077934
NT_034398
NT_034400
NT_077935
NT_077936
NT_034401
NT_034403
NT_032962
NT_004668
NT_004487
NT_004671
NT_034410
NT_077389
NT_021877
NT_077937
NT_021953
NT_077938
NT_077939
NT_077940
NT_004525
NT_004559
NT_031728
NT_021973
NT_004433
NT_030561
NT_004836
NT_004536
NT_077941
NT_031730
NT_077390
NT_077942
NT_032968
NT_004511
Links
Contig1
Acc1
Start1
Phs
BAC End Acc1
Or1
Chr2
Contig2
Acc2
Start2
Phs
BAC End Acc2
Or2
Clone
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL645944
29645059
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL645944
29779389
3
AQ106868
-1
chr1
NT_077923
AC092265
29490520
3
AQ122049
-1
CTD-3077D6
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL645944
29768605
3
AQ410525
-1
chr1
NT_077923
AC092265
29516540
3
AQ431241
-1
RP11-696C14
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL645944
29665438
3
B83686
-1
chr1
NT_077923
AC092265
29576843
3
B82816
-1
RP11-17O12
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL662906
29836306
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL137076
29968334
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL109740
30055593
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL021921
30119174
3
 
 
 
 
 
 
 
 
 
20 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL161638
30251680
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL591901
30356091
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL137857
30483935
3
 
 
 
 
 
 
 
 
 
14 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL137027
30633977
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL445235
30733119
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL356320
30898598
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114495
31005285
3
 
 
 
 
 
 
 
 
 
18 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL451070
31178188
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114494
31299402
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL592073
31443707
3
 
 
 
 
 
 
 
 
 
1 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114488
31458960
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL354919
31641814
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL136115
31764227
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL139249
31878322
3
 
 
 
 
 
 
 
 
 
3 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL445248
31931070
3
 
 
 
 
 
 
 
 
 
6 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL049795
32003017
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL121991
32118673
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL109945
32178188
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL356986
32286714
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL033529
32383104
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL138800
32528271
3
 
 
 
 
 
 
 
 
 
1 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114489
32530048
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114493
32700924
3
 
 
 
 
 
 
 
 
 
3 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL031602
32798305
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL355864
32871235
3
 
 
 
 
 
 
 
 
 
1 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL020995
32882825
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL662907
33033722
3
 
 
 
 
 
 
 
 
 
2 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL513327
33096415
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL138837
33283080
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC115285
33379953
3
 
 
 
 
 
 
 
 
 
7 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL355178
33440408
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL161643
33545242
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL139140
33632004
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL121980
33708233
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC116993
33806133
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL607106
33908026
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL596224
33942803
3
 
 
 
 
 
 
 
 
 
17 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC115286
34055587
3
 
 
 
 
 
 
 
 
 
23 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL360092
34178584
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL008634
34262273
3
 
 
 
 
 
 
 
 
 
24 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL365188
34412865
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC099565
34475356
3
 
 
 
 
 
 
 
 
 
14 confirm
NT_004511 (cont)
Links
Contig1
Acc1
Start1
Phs
BAC End Acc1
Or1
Chr2
Contig2
Acc2
Start2
Phs
BAC End Acc2
Or2
Clone
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL356256
34581434
3
 
 
 
 
 
 
 
 
 
4 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL121988
34600087
3
 
 
 
 
 
 
 
 
 
14 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL122010
34724964
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114490
34762420
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL607089
34914848
3
 
 
 
 
 
 
 
 
 
6 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL590434
35008658
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL160000
35192571
3
 
 
 
 
 
 
 
 
 
4 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL356362
35235617
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL445211
35350577
3
 
 
 
 
 
 
 
 
 
0 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC004865
35353473
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL157951
35471561
3
 
 
 
 
 
 
 
 
 
1 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL357035
35501350
3
 
 
 
 
 
 
 
 
 
0 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL354864
35514164
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL359186
35706460
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL139286
35752073
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL138787
35890250
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC114484
36018278
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL360074
36120807
3
 
 
 
 
 
 
 
 
 
3 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL591845
36157975
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC119675
36260282
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL445245
36397221
3
 
 
 
 
 
 
 
 
 
3 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL080286
36446333
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL596257
36597615
3
 
 
 
 
 
 
 
 
 
7 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC117945
36657784
3
 
 
 
 
 
 
 
 
 
14 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL591883
36816341
3
 
 
 
 
 
 
 
 
 
0 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL355386
36822128
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL031430
36953368
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL590127
37112549
3
 
 
 
 
 
 
 
 
 
4 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL353604
37152013
3
 
 
 
 
 
 
 
 
 
7 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL033524
37213410
3
 
 
 
 
 
 
 
 
 
15 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL449284
37315038
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL034379
37370767
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL513220
37480991
3
 
 
 
 
 
 
 
 
 
7 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AC104336
37573629
3
 
 
 
 
 
 
 
 
 
6 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004511
AL929472
37667992
2
 
 
 
 
 
 
 
 
 
8 confirm