Chromosome 1 - BAC End Pairs

Chromosome 1 - BAC End Pairs - Single Contig

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Main Reports Page

Main Assembly Page

Main BAC End Pairs Page

Whole Chromosome

Single Contigs

Line color code:

White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes

NT_077402	NT_077911	NT_077912	NT_034471	NT_077913	NT_077914	NT_077915	NT_077916
NT_004350	NT_004321	NT_004547	NT_077917	NT_077918	NT_077919	NT_028054	NT_021937
NT_077382	NT_004873	NT_077920	NT_030584	NT_077921	NT_004610	NT_004391	NT_077383
NT_077922	NT_077384	NT_037485	NT_077385	NT_004538	NT_077923	NT_004511	NT_077386
NT_004852	NT_032977	NT_004464	NT_077924	NT_034383	NT_077925	NT_077926	NT_004483
NT_037488	NT_004902	NT_026943	NT_004686	NT_077927	NT_021979	NT_034389	NT_077928
NT_028050	NT_030567	NT_029860	NT_077929	NT_019273	NT_004754	NT_077387	NT_022052
NT_022071	NT_077930	NT_077931	NT_077932	NT_077933	NT_004434	NT_077934	NT_034398
NT_034400	NT_077935	NT_077936	NT_034401	NT_034403	NT_032962	NT_004668	NT_004487
NT_004671	NT_034410	NT_077389	NT_021877	NT_077937	NT_021953	NT_077938	NT_077939
NT_077940	NT_004525	NT_004559	NT_031728	NT_021973	NT_004433	NT_030561	NT_004836
NT_004536	NT_077941	NT_031730	NT_077390	NT_077942	NT_032968

NT_031730

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_031730	AC118470	243907881	3										4 confirm
S/G/Y/R/B/O	NT_031730	AC118470	243950618	3	AQ571159	-1	chr1	NT_004536	AL606804	243815438	3	AQ601038	1	RP11-951B14
S/G/Y/R/B/O	NT_031730	AC118470	243948951	3	AQ194222	-1	chr1	NT_004536	AL606804	243818975	3	AQ237227	1	RP11-65L15
S/G/Y/R/B/O	NT_031730	AC118470	243953239	3	AQ282840	-1	chr1	NT_004536	AL606804	243839973	3	AQ282841	1	RP11-77I18
S/G/Y/R/B/O	NT_031730	AC118470	243925459	3	AQ193250	-1	chr1	NT_004536	AL606804	243844031	3	AQ137193	1	CTD-3066D15
S/G/Y/R/B/O	NT_031730	AC118470	243966422	3	AQ321098	-1	chr1	NT_004536	AL606804	243869568	3	AQ321100	1	RP11-109C14
S/G/Y/R/B/O	NT_031730	AC118470	243910492	3	AQ076646	-1	chr1	NT_004536	AL606804	243875736	3	AQ076648	1	CTD-2357P8
S/G/Y/R/B/O	NT_031730	AL450999	243966986	3										4 confirm
S/G/Y/R/B/O	NT_031730	AL450999	243984197	3	AQ390123	-1	chr1	NT_004536	AL606804	243835056	3	AQ390121	1	CTD-2548B21
S/G/Y/R/B/O	NT_031730	AL450999	243984025	3	AQ385428	-1	chr1	NT_004536	AL606804	243866841	3	AQ349703	1	RP11-133D7
S/G/Y/R/B/O	NT_031730	AC099571	243996883	3										17 confirm
S/G/Y/R/B/O	NT_031730	AC099571	244029134	3	AQ547630	-1	chr1	NT_004536	AL606804	243850693	3	AQ547632	1	RP11-382A12
S/G/Y/R/B/O	NT_031730	AC099570	244162296	3										16 confirm
S/G/Y/R/B/O	NT_031730	AL513488	244276304	3										5 confirm
S/G/Y/R/B/O	NT_031730	AL592313	244325018	3										5 confirm
S/G/Y/R/B/O	NT_031730	AL450303	244405333	3										16 confirm
S/G/Y/R/B/O	NT_031730	AL450303	244449653	3	AQ526915	1	chr1	NT_077390	AC098483	244914127	3	AQ526916	1	CTD-2603N21
S/G/Y/R/B/O	NT_031730	AL450303	244489328	3	AQ517954	1	chr1	NT_077390	AC098483	244895291	3	AQ429935	1	RP11-653G13
S/G/Y/R/B/O	NT_031730	AL450303	244532699	3	AQ339796	1	chr1	NT_077390	AC098483	244818736	3	AQ339868	1	RP11-597L3
S/G/Y/R/B/O	NT_031730	AL450303	244554852	3	AQ506797	1	chr1	NT_077390	AC098483	244785033	3	AQ506795	1	RP11-293D22
S/G/Y/R/B/O	NT_031730	AC138089	244563200	3										11 confirm
S/G/Y/R/B/O	NT_031730	AC138089	244574492	3	AQ036823	1	chr1	NT_077390	AC098483	244903693	3	AQ036819	1	CTD-2334J21
S/G/Y/R/B/O	NT_031730	AC138089	244579171	3	AQ593725	1	chr1	NT_077390	AC098483	244821830	3	AQ667599	1	CTD-2131B11
S/G/Y/R/B/O	NT_031730	AC138089	244619047	3	AQ302958	1	chr1	NT_077390	AC098483	244914130	3	AQ203666	1	CTD-3095H22
S/G/Y/R/B/O	NT_031730	AC138089	244645014	3	AQ057138	1	chr1	NT_077390	AC098483	244801184	3	AQ057140	1	CTD-2343C17
S/G/Y/R/B/O	NT_031730	AC138089	244647581	3	AQ629601	1	chr1	NT_077390	AC098483	244802244	3	AQ629599	-1	RP11-469B24
S/G/Y/R/B/O	NT_031730	AC138089	244656710	3	AQ237844	1	chr1	NT_077390	AC098483	244852648	3	AZ519065	-1	RP11-68F13
S/G/Y/R/B/O	NT_031730	AC138089	244669580	3	AQ121137	-1	chr1	NT_077390	AC098483	244894841	3	AQ138865	-1	CTD-3075M4
S/G/Y/R/B/O	NT_031730	AC138089	244677002	3	AQ508755	1	chr1	NT_077390	AC098483	244882966	3	AQ508757	-1	RP11-280A15
S/G/Y/R/B/O	NT_031730	AC138089	244690244	3	AQ475258	1	chr1	NT_077390	AC098483	244857478	3	AQ475257	-1	CTD-2580C20
S/G/Y/R/B/O	NT_031730	AC138089	244705363	3	AQ629599	1	chr1	NT_077390	AC098483	244903800	3	AQ629601	-1	RP11-469B24
S/G/Y/R/B/O	NT_031730	AC138089	244706452	3	AQ057140	-1	chr1	NT_077390	AC098483	244906595	3	AQ057138	-1	CTD-2343C17
S/G/Y/R/B/O	NT_031730	AC138089	244719865	3	AQ552342	-1	chr1	NT_077390	AL672295	244962552	3	AQ552341	-1	RP11-378I20