Chromosome 1 - BAC End Pairs

Chromosome 1 - BAC End Pairs - Single Contig

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Main Reports Page

Main Assembly Page

Main BAC End Pairs Page

Whole Chromosome

Single Contigs

Line color code:

White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes

NT_077402	NT_077911	NT_077912	NT_034471	NT_077913	NT_077914	NT_077915	NT_077916
NT_004350	NT_004321	NT_004547	NT_077917	NT_077918	NT_077919	NT_028054	NT_021937
NT_077382	NT_004873	NT_077920	NT_030584	NT_077921	NT_004610	NT_004391	NT_077383
NT_077922	NT_077384	NT_037485	NT_077385	NT_004538	NT_077923	NT_004511	NT_077386
NT_004852	NT_032977	NT_004464	NT_077924	NT_034383	NT_077925	NT_077926	NT_004483
NT_037488	NT_004902	NT_026943	NT_004686	NT_077927	NT_021979	NT_034389	NT_077928
NT_028050	NT_030567	NT_029860	NT_077929	NT_019273	NT_004754	NT_077387	NT_022052
NT_022071	NT_077930	NT_077931	NT_077932	NT_077933	NT_004434	NT_077934	NT_034398
NT_034400	NT_077935	NT_077936	NT_034401	NT_034403	NT_032962	NT_004668	NT_004487
NT_004671	NT_034410	NT_077389	NT_021877	NT_077937	NT_021953	NT_077938	NT_077939
NT_077940	NT_004525	NT_004559	NT_031728	NT_021973	NT_004433	NT_030561	NT_004836
NT_004536	NT_077941	NT_031730	NT_077390	NT_077942	NT_032968

NT_077935

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_077935	AL451043	145219940	3										0 confirm
S/G/Y/R/B/O	NT_077935	AL451043	145258540	3	AQ343751	-1	chr1	NT_077931	BX284650	141998220	2	AQ343749	-1	RP11-115G11
S/G/Y/R/B/O	NT_077935	AL451043	145244445	3	AQ536211	-1	chr1	NT_077931	BX284650	142018303	2	AQ536212	-1	RP11-321K5
S/G/Y/R/B/O	NT_077935	AL451043	145239998	3	AQ380026	-1	chr1	NT_077931	BX284650	142027902	2	AQ345257	-1	RP11-135C22
S/G/Y/R/B/O	NT_077935	AL451043	145244041	3	AQ417757	-1	chr1	NT_077931	BX284650	142092174	2	AQ417754	1	RP11-197O22
S/G/Y/R/B/O	NT_077935	AL451043	145244041	3	AQ417757	-1	chr1	NT_077932	BX248398	142148281	2	AQ417754	-1	RP11-197O22
S/G/Y/R/B/O	NT_077935	AL451043	145252897	3	AQ415436	-1	chr1	NT_077932	BX248398	142202584	2	AQ382535	-1	RP11-165J15
S/G/Y/R/B/O	NT_077935	AL451043	145252897	3	AQ415436	-1	chr1	NT_077933	AL592284	142359543	3	AQ382535	1	RP11-165J15
S/G/Y/R/B/O	NT_077935	AL451043	145240054	3	AQ268506	-1	chr1	NT_004434	AL359758	142840672	3	AQ268504	-1	RP11-69B7
S/G/Y/R/B/O	NT_077935	AL451043	145268138	3	AQ359317	1	chr1	NT_034398	AL356004	143562202	3	AQ359236	1	RP11-606D12
S/G/Y/R/B/O	NT_077935	AL451043	145258350	3	AQ529162	1	chr1	NT_034398	AL356004	143562293	3	AQ529160	1	RP11-369A4
S/G/Y/R/B/O	NT_077935	AL451043	145267507	3	AQ208899	1	chr1	NT_034398	AL356004	143579426	3	AQ136290	1	CTD-3056H8
S/G/Y/R/B/O	NT_077935	AL451043	145268185	3	AQ126433	1	chr1	NT_034398	AL356004	143583049	3	AQ131341	1	CTD-3037J11
S/G/Y/R/B/O	NT_077935	AL451043	145240651	3	AQ464691	1	chr1	NT_034398	AL356004	143583051	3	AQ464609	1	RP11-680D20
S/G/Y/R/B/O	NT_077935	AL451043	145253583	3	AQ739628	1	chr1	NT_034398	AL356004	143583051	3	AQ743123	1	RP11-960D20
S/G/Y/R/B/O	NT_077935	AL451043	145240656	3	AQ808801	1	chr1	NT_034398	AL356004	143606257	3	AQ813314	1	RP11-688M12
S/G/Y/R/B/O	NT_077935	AL451043	145264737	3	AQ461638	1	chr1	NT_034398	AL356004	143606261	3	AQ495324	1	RP11-780O23
S/G/Y/R/B/O	NT_077935	AL451043	145240909	3	AQ422736	1	chr1	NT_034398	AL356004	143618782	3	AQ422734	1	RP11-172G23
S/G/Y/R/B/O	NT_077935	AL451043	145221542	3	AQ481765	1	chr1	NT_034398	AL356004	143633053	3	AQ481763	1	RP11-235H13
S/G/Y/R/B/O	NT_077935	AL451043	145228469	3	B87343	1	chr1	NT_034398	AL356004	143633107	3	B87342	1	RP11-28J13
S/G/Y/R/B/O	NT_077935	AL451043	145240729	3	AQ343265	1	chr1	NT_034398	AL356004	143637094	3	AQ343268	1	RP11-115A9
S/G/Y/R/B/O	NT_077935	AL451043	145240729	3	AQ343265	1	chr1	NT_034400	AL139152	143833188	3	AQ343268	-1	RP11-115A9
S/G/Y/R/B/O	NT_077935	AL451043	145239998	3	AQ380026	-1	chr1	NT_077936	AL592207	145478108	3	AQ345257	-1	RP11-135C22
S/G/Y/R/B/O	NT_077935	AL451043	145244041	3	AQ417757	-1	chr1	NT_077936	AL022240	145542346	3	AQ417754	1	RP11-197O22
S/G/Y/R/B/O	NT_077935	AL451043	145244041	3	AQ417757	-1	chr1	NT_034401	AL954711	145794031	3	AQ417754	-1	RP11-197O22
S/G/Y/R/B/O	NT_077935	AL451043	145244445	3	AQ536211	-1	chr1	NT_077936	AL592207	145468509	3	AQ536212	-1	RP11-321K5
S/G/Y/R/B/O	NT_077935	AL451043	145252897	3	AQ415436	-1	chr1	NT_032962	AL358813	146382093	3	AQ382535	-1	RP11-165J15
S/G/Y/R/B/O	NT_077935	AL451043	145258540	3	AQ343751	-1	chr1	NT_077936	AL592207	145448430	3	AQ343749	-1	RP11-115G11
S/G/Y/R/B/O	NT_077935	AL451043	145267382	3	AQ475347	-1	chr1	NT_077936	AL592207	145411424	3	AQ475348	-1	CTD-2609P2
S/G/Y/R/B/O	NT_077935	AL451043	145268269	3	AQ278175	1	chr16	NT_010498	AC138625	70779149	3	AQ278701	1	CTD-2523J23
S/G/Y/R/B/O	NT_077935	AL451043	145253582	3	AQ313768	1	chr16	NT_010498	AC138625	70801449	3	AQ313770	1	RP11-95C20
S/G/Y/R/B/O	NT_077935	AL451043	145267457	3	AQ693023	1	chr16	NT_010498	AC138625	70818981	3	AQ679636	1	RP11-922O8
S/G/Y/R/B/O	NT_077935	AL451043	145244651	3	AQ268729	1	chr16	NT_010498	AC138625	70825757	3	AQ268727	1	RP11-73M23
S/G/Y/R/B/O	NT_077935	AL451043	145232350	3	AQ619339	1	chr16	NT_010498	AC138625	70825758	3	AQ494634	1	RP11-753B24
S/G/Y/R/B/O	NT_077935	AL451043	145256848	3	AQ185709	1	chr16	NT_010498	AC138625	70891399	3	AQ242379	1	CTD-2241O5