Chromosome 1 - BAC End Pairs

Chromosome 1 - BAC End Pairs - Single Contig

Description of this page

Main Reports Page

Main Assembly Page

Main BAC End Pairs Page

Whole Chromosome

Single Contigs

Line color code:

White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes

NT_077402	NT_077911	NT_077912	NT_034471	NT_077913	NT_077914	NT_077915	NT_077916
NT_004350	NT_004321	NT_004547	NT_077917	NT_077918	NT_077919	NT_028054	NT_021937
NT_077382	NT_004873	NT_077920	NT_030584	NT_077921	NT_004610	NT_004391	NT_077383
NT_077922	NT_077384	NT_037485	NT_077385	NT_004538	NT_077923	NT_004511	NT_077386
NT_004852	NT_032977	NT_004464	NT_077924	NT_034383	NT_077925	NT_077926	NT_004483
NT_037488	NT_004902	NT_026943	NT_004686	NT_077927	NT_021979	NT_034389	NT_077928
NT_028050	NT_030567	NT_029860	NT_077929	NT_019273	NT_004754	NT_077387	NT_022052
NT_022071	NT_077930	NT_077931	NT_077932	NT_077933	NT_004434	NT_077934	NT_034398
NT_034400	NT_077935	NT_077936	NT_034401	NT_034403	NT_032962	NT_004668	NT_004487
NT_004671	NT_034410	NT_077389	NT_021877	NT_077937	NT_021953	NT_077938	NT_077939
NT_077940	NT_004525	NT_004559	NT_031728	NT_021973	NT_004433	NT_030561	NT_004836
NT_004536	NT_077941	NT_031730	NT_077390	NT_077942	NT_032968

NT_034471

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_034471	AC114498	611232	3										2 confirm
S/G/Y/R/B/O	NT_034471	AC114498	645069	3	AQ242428	1	chr1	NT_077402	AL627309	212701	3	AQ224752	-1	CTD-2008L19
S/G/Y/R/B/O	NT_034471	AC114498	618772	3	AQ372585	1	chr6	NT_007583	AL031259	170523287	3	AQ372583	1	RP11-159H5
S/G/Y/R/B/O	NT_034471	AC114498	648321	3	AQ610093	1	chr5	NT_077451	AC008443	180732666	3	AQ407253	1	RP11-668K20
S/G/Y/R/B/O	NT_034471	AC114498	648435	3	AQ372539	1	chr6	NT_007583	AL008628	170508417	3	AQ347262	1	RP11-114B3
S/G/Y/R/B/O	NT_034471	AC114498	677323	3	AQ813290	1	chr6	NT_007583	AL008628	170508406	3	AQ808777	1	RP11-688I12
S/G/Y/R/B/O	NT_034471	AC114498	688812	3	AQ544961	1	chr15	NT_035325	AC027559	99874188	3	AQ544959	1	CTD-2611K5
S/G/Y/R/B/O	NT_034471	AC114498	710226	3	AQ232909	1	chr6	NT_007583	AL008628	170489161	3	AQ232980	1	CTD-2011D14
S/G/Y/R/B/O	NT_034471	AC114498	713828	3	AQ415917	1	chr5	NT_077451	AC008443	180702625	3	AQ415916	1	RP11-182F22
S/G/Y/R/B/O	NT_034471	AC114498	719676	3	AQ348321	1	chr6	NT_007583	AL008628	170468274	3	AQ348323	1	RP11-125M18
S/G/Y/R/B/O	NT_034471	AC114498	618763	3	AQ372650	1	chr6	NT_007583	AL031259	170523287	3	AQ372649	1	RP11-159J7
S/G/Y/R/B/O	NT_034471	AC114498	652910	3	AQ230345	1	chr6	NT_007583	AL031259	170523807	3	AQ244446	1	CTD-2027I3
S/G/Y/R/B/O	NT_034471	AC114498	696988	3	AQ483798	1	chr15	NT_035325	AC027559	99869965	3	AZ519910	1	RP11-259N2
S/G/Y/R/B/O	NT_034471	AC114498	699154	3	AQ549405	1	chr6	NT_007583	AL008628	170464089	3	AQ533048	1	RP11-371L15
S/G/Y/R/B/O	NT_034471	AC114498	710133	3	AQ263673	1	chr6	NT_007583	AL008628	170458398	3	AQ241540	1	CTD-2505K18
S/G/Y/R/B/O	NT_034471	AC114498	677323	3	AQ751426	1	chr19	NT_011255	AC016588	218798	3	AQ750603	-1	RP11-1149J4
S/G/Y/R/B/O	NT_034471	AC114498	646871	3	AQ662590	1	chr8	NT_023736	AC004908	348649	3	AQ716507	-1	RP11-1029B10
S/G/Y/R/B/O	NT_034471	AC114498	677344	3	AQ554972	1	chr8	NT_023736	AC136777	383692	3	AQ526964	-1	RP11-366B4
S/G/Y/R/B/O	NT_034471	AC114498	677317	3	AQ379552	1	chr8	NT_023736	AC136777	386628	3	AQ379549	-1	RP11-161B15
S/G/Y/R/B/O	NT_034471	AC114498	688809	3	AQ765657	1	chr8	NT_023736	AC136777	405461	3	AQ564270	-1	RP11-941K20
S/G/Y/R/B/O	NT_034471	AC114498	690543	3	AQ530117	1	chr8	NT_023736	AC136777	422403	3	AQ530116	-1	RP11-349C17
S/G/Y/R/B/O	NT_034471	AC114498	701355	3	AQ679319	1	chr8	NT_023736	AC136777	449737	3	AQ754450	-1	RP11-993O21
S/G/Y/R/B/O	NT_034471	AL669831	722781	3										2 confirm
S/G/Y/R/B/O	NT_034471	AL669831	867954	3	AQ107305	-1	chr1	NT_077912	AL732372	469479	3	AQ123665	-1	CTD-3102K12
S/G/Y/R/B/O	NT_034471	AL669831	723671	3	AQ814821	1	chr5	NT_077451	AC008620	180647116	2	AQ800907	1	RP11-834P23
S/G/Y/R/B/O	NT_034471	AL669831	723689	3	AQ140791	1	chr15	NT_035325	AC107977	99963994	3	AQ187106	1	CTD-3128G19
S/G/Y/R/B/O	NT_034471	AL669831	724931	3	AQ253433	1	chr6	NT_007583	AL008628	170488925	3	AQ064788	1	CTD-2221C2
S/G/Y/R/B/O	NT_034471	AL669831	790025	3	AQ482152	1	chr7	NT_007819	AC069008	45363928	3	AQ482155	1	RP11-257J16
S/G/Y/R/B/O	NT_034471	AL669831	806302	3	AQ442221	1	chr7	NT_007819	AC069008	45363924	3	AQ612327	1	RP11-697O20
S/G/Y/R/B/O	NT_034471	AL669831	807355	3	AQ721203	-1	chr7	NT_007819	AC091524	45690542	3	AQ707188	-1	RP11-1140G6
S/G/Y/R/B/O	NT_034471	AL669831	807927	3	AQ611292	1	chr7	NT_007819	AC069008	45323804	3	AQ498390	1	RP11-664B19
S/G/Y/R/B/O	NT_034471	AL669831	867954	3	AQ107305	-1	chr5	NT_077451	AC139237	180868280	3	AQ123665	-1	CTD-3102K12
S/G/Y/R/B/O	NT_034471	AL669831	798500	3	AQ224752	-1	chr8	NT_023736	AC131281	206843	3	AQ242428	1	CTD-2008L19
S/G/Y/R/B/O	NT_034471	AL669831	856083	3	AQ430279	1	chr8	NT_023736	AC131281	267821	3	AQ609458	1	RP11-654J19
S/G/Y/R/B/O	NT_034471	AL669831	873540	3	AQ177860	1	chr8	NT_023736	AC004908	320059	3	AQ136888	1	CTD-2213K13
S/G/Y/R/B/O	NT_034471	AL669831	724827	3	B50977	1	chr8	NT_023736	AC136777	408315	3	B50976	-1	CTB-191M5
S/G/Y/R/B/O	NT_034471	AL669831	723608	3	AQ110464	1	chr8	NT_023736	AC136777	413399	3	AQ110467	-1	CTD-2373L19
S/G/Y/R/B/O	NT_034471	AL669831	873089	3	AQ270294	-1	chr8	NT_023736	AC136777	413937	3	AQ092881	1	CTD-2180F21
S/G/Y/R/B/O	NT_034471	AL669831	855811	3	AQ094916	1	chr8	NT_023736	AC136777	428140	3	AQ120333	1	CTD-3029O11
S/G/Y/R/B/O	NT_034471	AL669831	859471	3	AQ120333	-1	chr8	NT_023736	AC136777	431983	3	AQ094916	-1	CTD-3029O11
S/G/Y/R/B/O	NT_034471	AL669831	870201	3	AQ164086	-1	chr8	NT_023736	AC083964	563251	3	AQ432032	-1	CTD-2270I22
S/G/Y/R/B/O	NT_034471	AL669831	826175	3	AQ179980	-1	chr8	NT_023736	AC083964	627233	3	AQ173556	-1	CTD-3202A22