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  Chromosome 1 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes
NT_077402 NT_077911 NT_077912 NT_034471 NT_077913 NT_077914 NT_077915 NT_077916
NT_004350 NT_004321 NT_004547 NT_077917 NT_077918 NT_077919 NT_028054 NT_021937
NT_077382 NT_004873 NT_077920 NT_030584 NT_077921 NT_004610 NT_004391 NT_077383
NT_077922 NT_077384 NT_037485 NT_077385 NT_004538 NT_077923 NT_004511 NT_077386
NT_004852 NT_032977 NT_004464 NT_077924 NT_034383 NT_077925 NT_077926 NT_004483
NT_037488 NT_004902 NT_026943 NT_004686 NT_077927 NT_021979 NT_034389 NT_077928
NT_028050 NT_030567 NT_029860 NT_077929 NT_019273 NT_004754 NT_077387 NT_022052
NT_022071 NT_077930 NT_077931 NT_077932 NT_077933 NT_004434 NT_077934 NT_034398
NT_034400 NT_077935 NT_077936 NT_034401 NT_034403 NT_032962 NT_004668 NT_004487
NT_004671 NT_034410 NT_077389 NT_021877 NT_077937 NT_021953 NT_077938 NT_077939
NT_077940 NT_004525 NT_004559 NT_031728 NT_021973 NT_004433 NT_030561 NT_004836
NT_004536 NT_077941 NT_031730 NT_077390 NT_077942 NT_032968


  NT_004836
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004836AL7322922315532293         7 confirm
S/G/Y/R/B/O NT_004836AL7322922315882003AQ353152-1chr1NT_030561AL3918322314317373AQ3531541CTD-2536K10
S/G/Y/R/B/O NT_004836AL1334182316042443         5 confirm
S/G/Y/R/B/O NT_004836AL1334182316231543AQ425026-1chr1NT_030561AL3918322314605203AQ4250221CTD-2563M11
S/G/Y/R/B/O NT_004836AL1334182316211413AQ462418-1chr1NT_030561AL3918322314760023AQ4948111RP11-739C15
S/G/Y/R/B/O NT_004836AL3919942316798293         16 confirm
S/G/Y/R/B/O NT_004836AL3575562318201023         1 confirm
S/G/Y/R/B/O NT_004836AL6722372318695093         6 confirm
S/G/Y/R/B/O NT_004836AL1359282319098893         9 confirm
S/G/Y/R/B/O NT_004836AL6722382319908283         3 confirm
S/G/Y/R/B/O NT_004836AL5838442320285013         5 confirm
S/G/Y/R/B/O NT_004836AL3907652321037403         7 confirm
S/G/Y/R/B/O NT_004836AL1219972321818413         14 confirm
S/G/Y/R/B/O NT_004836AL1332862322943673         16 confirm
S/G/Y/R/B/O NT_004836AL1391612323876213         17 confirm
S/G/Y/R/B/O NT_004836AL1220182324892293         18 confirm
S/G/Y/R/B/O NT_004836AL1391622326160403         7 confirm
S/G/Y/R/B/O NT_004836AL4503092326883593         23 confirm
S/G/Y/R/B/O NT_004836AL3546932328530063         12 confirm
S/G/Y/R/B/O NT_004836AL1361052329279923         10 confirm
S/G/Y/R/B/O NT_004836AL3599212329827883         16 confirm
S/G/Y/R/B/O NT_004836AL3591852331945463         15 confirm
S/G/Y/R/B/O NT_004836AL3592592333033873         24 confirm
S/G/Y/R/B/O NT_004836AL5961332334741403         3 confirm
S/G/Y/R/B/O NT_004836AL3918092335019913         22 confirm
S/G/Y/R/B/O NT_004836AL3567732336675393         13 confirm
S/G/Y/R/B/O NT_004836AL4454732337721643         28 confirm
S/G/Y/R/B/O NT_004836AL4420652339557133         26 confirm
S/G/Y/R/B/O NT_004836AL3653322340582753         25 confirm
S/G/Y/R/B/O NT_004836AL5131302342225823         2 confirm
S/G/Y/R/B/O NT_004836AL3599242342403813         10 confirm
S/G/Y/R/B/O NT_004836AL5903962343601813         13 confirm
S/G/Y/R/B/O NT_004836AL3592032344802893         13 confirm
S/G/Y/R/B/O NT_004836AL3575012345996513         14 confirm
S/G/Y/R/B/O NT_004836AL5961782346441733         13 confirm
S/G/Y/R/B/O NT_004836AL3560102347220963         28 confirm
S/G/Y/R/B/O NT_004836AL3600102348712783         2 confirm
S/G/Y/R/B/O NT_004836AL3595512348945793         16 confirm
S/G/Y/R/B/O NT_004836AL5132092349939653         12 confirm
S/G/Y/R/B/O NT_004836AL5838252351321363         22 confirm
S/G/Y/R/B/O NT_004836AL5961072353289303         9 confirm
S/G/Y/R/B/O NT_004836AL6719852353589063         3 confirm
S/G/Y/R/B/O NT_004836AL6065032353647993         14 confirm
S/G/Y/R/B/O NT_004836AL5901352355059033         15 confirm
S/G/Y/R/B/O NT_004836AC0934262355813303         18 confirm
S/G/Y/R/B/O NT_004836AL5131892357484303         6 confirm
S/G/Y/R/B/O NT_004836AL6273882358059523         8 confirm
S/G/Y/R/B/O NT_004836AC0995642358233663         23 confirm
S/G/Y/R/B/O NT_004836AL3574992360108753         7 confirm
S/G/Y/R/B/O NT_004836AL5135432361044563         20 confirm


  NT_004836 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004836AC1044602361913633         17 confirm
S/G/Y/R/B/O NT_004836AL3563612363538773         13 confirm
S/G/Y/R/B/O NT_004836AL3599182364797093         21 confirm
S/G/Y/R/B/O NT_004836AL5133422366860923         24 confirm
S/G/Y/R/B/O NT_004836AL5904902368132003         10 confirm
S/G/Y/R/B/O NT_004836AL6460162368629703         16 confirm
S/G/Y/R/B/O NT_004836AL3581762369377833         19 confirm
S/G/Y/R/B/O NT_004836AL5909652371200943         7 confirm
S/G/Y/R/B/O NT_004836AL3651842371894763         23 confirm
S/G/Y/R/B/O NT_004836AL5960822373611103         5 confirm
S/G/Y/R/B/O NT_004836AL5906822373790293         24 confirm
S/G/Y/R/B/O NT_004836AL5123072375321853         25 confirm
S/G/Y/R/B/O NT_004836AL5920762377125123         12 confirm
S/G/Y/R/B/O NT_004836AL3597642378111043         19 confirm
S/G/Y/R/B/O NT_004836AL6064762379658113         0 confirm
S/G/Y/R/B/O NT_004836AL5918982379678053         6 confirm
S/G/Y/R/B/O NT_004836AL1333902380358163         3 confirm
S/G/Y/R/B/O NT_004836AL5918972381075883         0 confirm
S/G/Y/R/B/O NT_004836BX3225322381079413         1 confirm
S/G/Y/R/B/O NT_004836BX2484052381481613         3 confirm
S/G/Y/R/B/O NT_004836AL3653662382323073         4 confirm
S/G/Y/R/B/O NT_004836AC0920162383762743         7 confirm
S/G/Y/R/B/O NT_004836AC0920162384521633AQ3764001chr10NT_008705AL133217387818943AQ3764161RP11-151E7
S/G/Y/R/B/O NT_004836AL5916862384603593         10 confirm
S/G/Y/R/B/O NT_004836AL5916862385173043AQ5694061chr10NT_008705AL132658387282173AQ5986841RP11-912J18
S/G/Y/R/B/O NT_004836AL5916862386041133AQ1200561chr10NT_008705AL132658387315023AQ1332421CTD-3022L10
S/G/Y/R/B/O NT_004836AL5916862384771053AQ6191041chr10NT_008705AL132658387315053AQ6188611RP11-748N3
S/G/Y/R/B/O NT_004836AL5838452386070573         15 confirm
S/G/Y/R/B/O NT_004836AL5838452386592363AQ1704281chr10NT_008705AL117339387119023AQ1499321CTD-3192J10
S/G/Y/R/B/O NT_004836AL5838452386467453AQ043693-1chr10NT_008705AL133216388778343AQ043691-1CTD-2330I4
S/G/Y/R/B/O NT_004836AL5838452386208053AQ198165-1chr10NT_008705AL133216389591573AQ198163-1RP11-60B1
S/G/Y/R/B/O NT_004836AL3602712386612113         14 confirm
S/G/Y/R/B/O NT_004836AL3602712387066023AQ0850361chr10NT_008705AL117339385526323AQ1470831CTD-2265G10
S/G/Y/R/B/O NT_004836AL3602712386651553AQ2538911chr10NT_008705AL117339385785723AQ2193991CTD-3245L20
S/G/Y/R/B/O NT_004836AL3602712386871963AQ0755941chr10NT_008705AL117339386250093AQ0755971CTD-2367G1
S/G/Y/R/B/O NT_004836AL3602712387487103B91499-1chr10NT_008705AL132658387310233B91497-1CTD-2172I15
S/G/Y/R/B/O NT_004836AL3602712387485893AQ012576-1chr10NT_008705AL133217387523363AQ012574-1CTD-2299G13
S/G/Y/R/B/O NT_004836AL4457042387560003         24 confirm
S/G/Y/R/B/O NT_004836AL4457042388313473AQ044211-1chr10NT_008705AL117339386746233AQ044210-1CTD-2337M15
S/G/Y/R/B/O NT_004836AL4457042387722273AQ054236-1chr10NT_008705AL132658387251203AQ054234-1CTD-2343F19
S/G/Y/R/B/O NT_004836AL4457042388322903AQ748044-1chr10NT_008705AL132658387273373AQ747479-1RP11-1113O14
S/G/Y/R/B/O NT_004836AL4457042387941143AQ572189-1chr10NT_008705AL133217387469703AQ667350-1CTD-2120E4
S/G/Y/R/B/O NT_004836AL4457042388152173AQ231973-1chr10NT_008705AL133217387474443AQ214410-1CTD-3243P15
S/G/Y/R/B/O NT_004836AL4457042388015933B74963-1chr10NT_008705AL133217387574803B74962-1RP11-12D7
S/G/Y/R/B/O NT_004836AL4457042387826823AQ194445-1chr10NT_008705AL133217387598623AQ194443-1RP11-45O6
S/G/Y/R/B/O NT_004836AC0997852389176623         24 confirm
S/G/Y/R/B/O NT_004836AC1184712390926373         9 confirm
S/G/Y/R/B/O NT_004836AL4456752391487063         16 confirm
S/G/Y/R/B/O NT_004836AL4456752392926383AQ0445351chr10NT_008705AL133216389178413AQ0445321CTD-2328K11
S/G/Y/R/B/O NT_004836AL4456752393024273AQ1770691chr4NT_016354AC1100791199691973AQ1370771CTD-2220H21


  NT_004836 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004836AL4456752392926383AQ0445351chr4NT_016354AC1100791199759873AQ0445321CTD-2328K11
S/G/Y/R/B/O NT_004836AL4456752393193343AQ314072-1chrYNT_011875AC011293131129893AQ3140701RP11-102H23
S/G/Y/R/B/O NT_004836AL4456752392565843AQ0991381chrYNT_011875AC011293132670433AQ126875-1CTD-3047A17
S/G/Y/R/B/O NT_004836AL4456752391487563AQ0941971chrYNT_011875AC012502132723043AQ165104-1CTD-3022B11
S/G/Y/R/B/O NT_004836AL4456752392926383AQ0445351chrYNT_011903AC012005257038333AQ0445321CTD-2328K11
S/G/Y/R/B/O NT_004836AL6038252393198153         3 confirm
S/G/Y/R/B/O NT_004836AL6038252393198143AQ1431061chr4NT_016354AC1273881198891413AQ1430211CTD-3064M11
S/G/Y/R/B/O NT_004836AL6065342393533573         17 confirm
S/G/Y/R/B/O NT_004836AL6065342394464553AQ0085671chr10NT_008705AL133217387470293B996101CTD-2281F17
S/G/Y/R/B/O NT_004836AL6065342393556033AQ4019421chr4NT_016354AC0967621195372523AQ4316871RP11-621I20
S/G/Y/R/B/O NT_004836AL6065342394713403AQ4807311chr4NT_016354AC0926701197327263AQ4807341RP11-259I4
S/G/Y/R/B/O NT_004836AL6065342394972783AQ0084311chr4NT_016354AC0926701197630853AQ0084341CTD-2274I5
S/G/Y/R/B/O NT_004836AL6065342393642193AQ5997311chr4NT_016354AC0926701197858603AQ7564731RP11-930D19
S/G/Y/R/B/O NT_004836AL6065342395082763AQ1904011chr4NT_016354AC0926701198216663AQ2052381CTD-3224E3
S/G/Y/R/B/O NT_004836AL6065342393908723AQ3113761chr4NT_016354AC0926701198513103AQ3113771CTD-2384J5
S/G/Y/R/B/O NT_004836AL6065342395083913AQ311377-1chr4NT_016354AC1100791199768443AQ311376-1CTD-2384J5
S/G/Y/R/B/O NT_004836AL6065342394821363AQ513494-1chr4NT_016354AC1100791200516823AQ462201-1RP11-722I1
S/G/Y/R/B/O NT_004836AL6065342394708153AQ466153-1chr4NT_016354AC1100791200526213AQ498895-1RP11-730I21
S/G/Y/R/B/O NT_004836AL6065342394751823AQ697786-1chr4NT_016354AC1100791200594193AQ720302-1RP11-1129M24
S/G/Y/R/B/O NT_004836AL6065342394762663AQ819632-1chr4NT_016354AC1080301200790563AQ607206-1RP11-902H7
S/G/Y/R/B/O NT_004836AL6065342393986103AQ137077-1chrYNT_011875AC011293132675553AQ1770691CTD-2220H21
S/G/Y/R/B/O NT_004836AL6065342393698893AQ0366011chrYNT_011903AC012005256400743AQ0366031CTD-2319L14
S/G/Y/R/B/O NT_004836AL6065342394544453AQ129427-1chrYNT_011903AC006386266951593AQ1267681CTD-3049I3
S/G/Y/R/B/O NT_004836AL6065342393698893AQ0366011chrYNT_011903AC006328268280393AQ036603-1CTD-2319L14
S/G/Y/R/B/O NT_004836AL6065342394544453AQ129427-1chrYNT_011903AC012005257728983AQ126768-1CTD-3049I3
S/G/Y/R/B/O NT_004836AC0927822395348993         7 confirm
S/G/Y/R/B/O NT_004836AC0927822396290693AQ072524-1chr4NT_016354AC0926701198289383AQ167951-1CTD-2232L15
S/G/Y/R/B/O NT_004836AC0927822395373963AQ205238-1chr4NT_016354AC0926701198514033AQ190401-1CTD-3224E3
S/G/Y/R/B/O NT_004836AC0927822395678303AQ005801-1chr4NT_016354AC1100791199459733AQ005803-1CTD-2292E20
S/G/Y/R/B/O NT_004836AC0928062396308623         15 confirm
S/G/Y/R/B/O NT_004836AC0928062396594953AQ408982-1chr4NT_016354AC0926701198788683AQ401542-1RP11-643G2
S/G/Y/R/B/O NT_004836AC0928062396455493AQ015387-1chr4NT_016354AC0926701198509923AQ015388-1CTD-2304D12
S/G/Y/R/B/O NT_004836AC0965392397248743         25 confirm
S/G/Y/R/B/O NT_004836AL5917212399081813         8 confirm
S/G/Y/R/B/O NT_004836AL6628892399892953         16 confirm
S/G/Y/R/B/O NT_004836AL5921512401143313         14 confirm
S/G/Y/R/B/O NT_004836AL5918852402606763         16 confirm
S/G/Y/R/B/O NT_004836AL5904832403863383         22 confirm
S/G/Y/R/B/O NT_004836AL3581772404825663         17 confirm
S/G/Y/R/B/O NT_004836AL6629152405717683         4 confirm
S/G/Y/R/B/O NT_004836AL3554752406256973         21 confirm
S/G/Y/R/B/O NT_004836AL6454652407064133         13 confirm
S/G/Y/R/B/O NT_004836AL5915942407845553         11 confirm
S/G/Y/R/B/O NT_004836AC0997572408984603         8 confirm
S/G/Y/R/B/O NT_004836AL4510072410533233         13 confirm
S/G/Y/R/B/O NT_004836BX3230462411655142         18 confirm
S/G/Y/R/B/O NT_004836AL6064832412880833         2 confirm
S/G/Y/R/B/O NT_004836AL3565122413145203         5 confirm
S/G/Y/R/B/O NT_004836AL5897632413865493         17 confirm
S/G/Y/R/B/O NT_004836AL5921032415513213         7 confirm


  NT_004836 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004836AL8453342416503413         4 confirm
S/G/Y/R/B/O NT_004836AL3599832416705103         14 confirm
S/G/Y/R/B/O NT_004836AC0931532418347643         14 confirm
S/G/Y/R/B/O NT_004836AC1044622419091193         16 confirm
S/G/Y/R/B/O NT_004836AC1044622420178503AQ3929781chr1NT_004536AL4454682421605593AQ392979-1CTD-2544L14
S/G/Y/R/B/O NT_004836AC1044622420871763AQ4200731chr1NT_004536AL4454682421468183AQ420075-1RP11-203J12
S/G/Y/R/B/O NT_004836AL5124122420923903         0 confirm