Chromosome 1 - BAC End Pairs - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main BAC End Pairs Page
Whole Chromosome
Single Contigs
Line color code:
White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes
NT_077402
NT_077911
NT_077912
NT_034471
NT_077913
NT_077914
NT_077915
NT_077916
NT_004350
NT_004321
NT_004547
NT_077917
NT_077918
NT_077919
NT_028054
NT_021937
NT_077382
NT_004873
NT_077920
NT_030584
NT_077921
NT_004610
NT_004391
NT_077383
NT_077922
NT_077384
NT_037485
NT_077385
NT_004538
NT_077923
NT_004511
NT_077386
NT_004852
NT_032977
NT_004464
NT_077924
NT_034383
NT_077925
NT_077926
NT_004483
NT_037488
NT_004902
NT_026943
NT_004686
NT_077927
NT_021979
NT_034389
NT_077928
NT_028050
NT_030567
NT_029860
NT_077929
NT_019273
NT_004754
NT_077387
NT_022052
NT_022071
NT_077930
NT_077931
NT_077932
NT_077933
NT_004434
NT_077934
NT_034398
NT_034400
NT_077935
NT_077936
NT_034401
NT_034403
NT_032962
NT_004668
NT_004487
NT_004671
NT_034410
NT_077389
NT_021877
NT_077937
NT_021953
NT_077938
NT_077939
NT_077940
NT_004525
NT_004559
NT_031728
NT_021973
NT_004433
NT_030561
NT_004836
NT_004536
NT_077941
NT_031730
NT_077390
NT_077942
NT_032968
NT_004610
Links
Contig1
Acc1
Start1
Phs
BAC End Acc1
Or1
Chr2
Contig2
Acc2
Start2
Phs
BAC End Acc2
Or2
Clone
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL954340
18342731
3
 
 
 
 
 
 
 
 
 
1 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL080251
18358653
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL139283
18459869
3
 
 
 
 
 
 
 
 
 
6 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL139283
18484548
3
AQ692535
-1
chr1
NT_077921
AL831755
18215642
3
AQ679068
1
RP11-998A17
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL139283
18471572
3
AQ669084
-1
chr1
NT_077921
AL831755
18258087
3
AQ591959
1
RP11-990I6
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL139283
18517902
3
AQ716074
-1
chr1
NT_077921
AL831755
18280232
3
AQ728095
1
RP11-1023P23
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL137127
18532106
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL357564
18628938
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL035413
18690622
3
 
 
 
 
 
 
 
 
 
22 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL445163
18842752
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL359199
18899781
3
 
 
 
 
 
 
 
 
 
23 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031727
19046071
3
 
 
 
 
 
 
 
 
 
26 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031730
19207919
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL391883
19256651
3
 
 
 
 
 
 
 
 
 
26 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL358253
19381022
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL645485
19480846
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL158172
19521324
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
Z98257
19618075
3
 
 
 
 
 
 
 
 
 
16 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL020998
19753546
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL139254
19832212
3
 
 
 
 
 
 
 
 
 
4 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL391357
19952667
3
 
 
 
 
 
 
 
 
 
8 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL663074
20145743
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL606477
20229524
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL358392
20367489
3
 
 
 
 
 
 
 
 
 
18 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL627311
20443730
3
 
 
 
 
 
 
 
 
 
16 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL672037
20608906
3
 
 
 
 
 
 
 
 
 
2 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031005
20646480
3
 
 
 
 
 
 
 
 
 
7 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031728
20754388
3
 
 
 
 
 
 
 
 
 
2 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL365182
20828325
3
 
 
 
 
 
 
 
 
 
4 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20883720
3
 
 
 
 
 
 
 
 
 
14 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20918300
3
AQ582627
1
chr1
NT_077920
AL669962
15995567
3
AQ582624
1
RP11-454G22
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20918293
3
AQ199269
1
chr1
NT_077920
AL137802
16016502
3
AQ199268
1
RP11-45I3
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20907861
3
B55149
1
chr1
NT_077920
AL355149
16109982
3
B55150
1
CTC-386E12
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
21012536
3
AQ076032
-1
chr1
NT_077920
AL355149
16111130
3
AQ076029
1
CTD-2368G17
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20917791
3
AQ388340
-1
chr1
NT_077920
AL355149
16113660
3
AQ388341
-1
RP11-134L15
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
21012536
3
AQ076032
-1
chr1
NT_030584
BX284668
16131416
3
AQ076029
-1
CTD-2368G17
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20907861
3
B55149
1
chr1
NT_030584
BX284668
16132114
3
B55150
-1
CTC-386E12
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20934065
3
AZ516616
-1
chr1
NT_030584
BX284668
16149442
3
AQ478136
1
RP11-248K3
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20938280
3
AQ261140
1
chr1
NT_030584
AL049569
16343822
3
AQ261142
-1
CTD-2504M2
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL592309
20917791
3
AQ388340
-1
chr1
NT_030584
BX284668
16128559
3
AQ388341
1
RP11-134L15
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL359815
21047688
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL590103
21197339
3
 
 
 
 
 
 
 
 
 
13 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL590556
21370501
3
 
 
 
 
 
 
 
 
 
17 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031281
21484996
3
 
 
 
 
 
 
 
 
 
10 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL445253
21614362
3
 
 
 
 
 
 
 
 
 
0 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031279
21629791
3
 
 
 
 
 
 
 
 
 
18 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL591122
21763419
3
 
 
 
 
 
 
 
 
 
18 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL358788
21868070
3
 
 
 
 
 
 
 
 
 
9 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL035703
21941052
3
 
 
 
 
 
 
 
 
 
18 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL158086
22101757
3
 
 
 
 
 
 
 
 
 
11 confirm
NT_004610 (cont)
Links
Contig1
Acc1
Start1
Phs
BAC End Acc1
Or1
Chr2
Contig2
Acc2
Start2
Phs
BAC End Acc2
Or2
Clone
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL611946
22187077
3
 
 
 
 
 
 
 
 
 
5 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL512444
22229998
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL035704
22352587
3
 
 
 
 
 
 
 
 
 
11 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL355534
22466543
3
 
 
 
 
 
 
 
 
 
2 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL031428
22484029
3
 
 
 
 
 
 
 
 
 
19 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL161672
22584880
3
 
 
 
 
 
 
 
 
 
2 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL049576
22619299
3
 
 
 
 
 
 
 
 
 
12 confirm
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL049576
22654926
3
AQ262715
1
chr1
NT_004391
AL109936
22766309
3
AQ262709
-1
CTD-2504F18
S
/
G
/
Y
/
R
/
B
/
O
NT_004610
AL353585
22685738
3
 
 
 
 
 
 
 
 
 
2 confirm