Chromosome 1 - BAC End Pairs

Chromosome 1 - BAC End Pairs - Single Contig

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Main Reports Page

Main Assembly Page

Main BAC End Pairs Page

Whole Chromosome

Single Contigs

Line color code:

White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes

NT_077402	NT_077911	NT_077912	NT_034471	NT_077913	NT_077914	NT_077915	NT_077916
NT_004350	NT_004321	NT_004547	NT_077917	NT_077918	NT_077919	NT_028054	NT_021937
NT_077382	NT_004873	NT_077920	NT_030584	NT_077921	NT_004610	NT_004391	NT_077383
NT_077922	NT_077384	NT_037485	NT_077385	NT_004538	NT_077923	NT_004511	NT_077386
NT_004852	NT_032977	NT_004464	NT_077924	NT_034383	NT_077925	NT_077926	NT_004483
NT_037488	NT_004902	NT_026943	NT_004686	NT_077927	NT_021979	NT_034389	NT_077928
NT_028050	NT_030567	NT_029860	NT_077929	NT_019273	NT_004754	NT_077387	NT_022052
NT_022071	NT_077930	NT_077931	NT_077932	NT_077933	NT_004434	NT_077934	NT_034398
NT_034400	NT_077935	NT_077936	NT_034401	NT_034403	NT_032962	NT_004668	NT_004487
NT_004671	NT_034410	NT_077389	NT_021877	NT_077937	NT_021953	NT_077938	NT_077939
NT_077940	NT_004525	NT_004559	NT_031728	NT_021973	NT_004433	NT_030561	NT_004836
NT_004536	NT_077941	NT_031730	NT_077390	NT_077942	NT_032968

NT_077920

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_077920	AL451042	15665182	3										5 confirm
S/G/Y/R/B/O	NT_077920	AL451042	15704641	3	AQ355642	-1	chr1	NT_004873	AL034555	15524643	3	AQ355644	1	CTD-2541B24
S/G/Y/R/B/O	NT_077920	AL451042	15704554	3	AZ515743	-1	chr1	NT_004873	AL034555	15524649	3	AZ515744	1	CTD-2548A23
S/G/Y/R/B/O	NT_077920	AL451042	15689941	3	AQ591679	-1	chr1	NT_004873	AL034555	15531981	3	AQ669002	1	RP11-999E23
S/G/Y/R/B/O	NT_077920	AL451042	15715045	3	AQ456847	-1	chr1	NT_004873	AL034555	15548456	3	AQ519873	1	RP11-766G9
S/G/Y/R/B/O	NT_077920	AL109627	15751280	3										10 confirm
S/G/Y/R/B/O	NT_077920	AL358794	15870106	3										7 confirm
S/G/Y/R/B/O	NT_077920	AL358794	15894069	3	AQ691286	1	chr1	NT_030584	BX284668	16129110	3	AQ811478	1	RP11-934E7
S/G/Y/R/B/O	NT_077920	AL669962	15995055	3										1 confirm
S/G/Y/R/B/O	NT_077920	AL669962	15995567	3	AQ582624	1	chr1	NT_004610	AL592309	20918300	3	AQ582627	1	RP11-454G22
S/G/Y/R/B/O	NT_077920	AL137802	16001972	3										6 confirm
S/G/Y/R/B/O	NT_077920	AL137802	16016502	3	AQ199268	1	chr1	NT_004610	AL592309	20918293	3	AQ199269	1	RP11-45I3
S/G/Y/R/B/O	NT_077920	AL137802	16026814	3	AQ718745	1	chr1	NT_030584	BX284668	16149443	3	AQ719357	1	RP11-1087H24
S/G/Y/R/B/O	NT_077920	AL137802	16040754	3	B55149	-1	chr1	NT_030584	BX284668	16132114	3	B55150	-1	CTC-386E12
S/G/Y/R/B/O	NT_077920	AL137802	16059380	3	AQ601100	1	chr1	NT_030584	BX284668	16129106	3	AQ571223	1	RP11-951N2
S/G/Y/R/B/O	NT_077920	AL137802	16059435	3	AQ204179	1	chr1	NT_030584	BX284668	16167332	3	AQ204102	1	CTD-3107K24
S/G/Y/R/B/O	NT_077920	AL137802	16073472	3	B95222	1	chr1	NT_030584	BX284668	16217121	3	B95223	1	CTD-2173P20
S/G/Y/R/B/O	NT_077920	AL355149	16088148	3										5 confirm
S/G/Y/R/B/O	NT_077920	AL355149	16100981	3	AQ187690	-1	chr1	NT_030584	BX284668	16162035	3	AQ183205	-1	CTD-3139L12
S/G/Y/R/B/O	NT_077920	AL355149	16103947	3	AQ572839	-1	chr1	NT_030584	AL049569	16310278	3	AQ692360	-1	RP11-974B22
S/G/Y/R/B/O	NT_077920	AL355149	16109982	3	B55150	1	chr1	NT_004610	AL592309	20907861	3	B55149	1	CTC-386E12
S/G/Y/R/B/O	NT_077920	AL355149	16111130	3	AQ076029	1	chr1	NT_004610	AL592309	21012536	3	AQ076032	-1	CTD-2368G17
S/G/Y/R/B/O	NT_077920	AL355149	16111467	3	AQ082144	-1	chr1	NT_030584	AL049569	16297988	3	AQ082146	-1	RP11-54F24
S/G/Y/R/B/O	NT_077920	AL355149	16112320	3	AQ376966	1	chr1	NT_030561	AL360294	231291761	3	AQ376968	-1	RP11-151K21
S/G/Y/R/B/O	NT_077920	AL355149	16112436	3	AQ633952	1	chr1	NT_030561	AL360294	231317861	3	AQ633954	-1	RP11-476B5
S/G/Y/R/B/O	NT_077920	AL355149	16112929	3	AQ381214	-1	chr1	NT_030584	AL049569	16292139	3	AQ381218	-1	RP11-137B15
S/G/Y/R/B/O	NT_077920	AL355149	16113139	3	AQ564013	-1	chr1	NT_030584	AL049569	16331238	3	AQ569839	-1	RP11-910N10
S/G/Y/R/B/O	NT_077920	AL355149	16113334	3	AQ571223	-1	chr1	NT_030584	BX284668	16188437	3	AQ601100	-1	RP11-951N2
S/G/Y/R/B/O	NT_077920	AL355149	16113510	3	AQ551271	-1	chr1	NT_030584	AL049569	16298094	3	AQ551269	-1	RP11-419A8
S/G/Y/R/B/O	NT_077920	AL355149	16113660	3	AQ388341	-1	chr1	NT_004610	AL592309	20917791	3	AQ388340	-1	RP11-134L15
S/G/Y/R/B/O	NT_077920	AL355149	16114202	3	AQ350785	1	chr1	NT_030561	AL360294	231300154	3	AQ319038	-1	RP11-110N9