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  Chromosome 1 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes
NT_077402 NT_077911 NT_077912 NT_034471 NT_077913 NT_077914 NT_077915 NT_077916
NT_004350 NT_004321 NT_004547 NT_077917 NT_077918 NT_077919 NT_028054 NT_021937
NT_077382 NT_004873 NT_077920 NT_030584 NT_077921 NT_004610 NT_004391 NT_077383
NT_077922 NT_077384 NT_037485 NT_077385 NT_004538 NT_077923 NT_004511 NT_077386
NT_004852 NT_032977 NT_004464 NT_077924 NT_034383 NT_077925 NT_077926 NT_004483
NT_037488 NT_004902 NT_026943 NT_004686 NT_077927 NT_021979 NT_034389 NT_077928
NT_028050 NT_030567 NT_029860 NT_077929 NT_019273 NT_004754 NT_077387 NT_022052
NT_022071 NT_077930 NT_077931 NT_077932 NT_077933 NT_004434 NT_077934 NT_034398
NT_034400 NT_077935 NT_077936 NT_034401 NT_034403 NT_032962 NT_004668 NT_004487
NT_004671 NT_034410 NT_077389 NT_021877 NT_077937 NT_021953 NT_077938 NT_077939
NT_077940 NT_004525 NT_004559 NT_031728 NT_021973 NT_004433 NT_030561 NT_004836
NT_004536 NT_077941 NT_031730 NT_077390 NT_077942 NT_032968


  NT_004668
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004668AL1622581503254743         3 confirm
S/G/Y/R/B/O NT_004668AL5921501503997203         1 confirm
S/G/Y/R/B/O NT_004668AL5921501504006723AQ189875-1chr1NT_032962AL1574041502548583AQ1805451CTD-3219I16
S/G/Y/R/B/O NT_004668AL7138891504131703         2 confirm
S/G/Y/R/B/O NT_004668AL7138891504538373AQ496223-1chr1NT_032962AL1574041502715053AQ4345841RP11-662B1
S/G/Y/R/B/O NT_004668AL7138891504538273AQ496246-1chr1NT_032962AL1574041502715053AQ4346091RP11-662F3
S/G/Y/R/B/O NT_004668AL5135231504633543         9 confirm
S/G/Y/R/B/O NT_004668AL8317371506135203         1 confirm
S/G/Y/R/B/O NT_004668AL5921521506567443         1 confirm
S/G/Y/R/B/O NT_004668AL3584721506691563         9 confirm
S/G/Y/R/B/O NT_004668AL5135461508429833         4 confirm
S/G/Y/R/B/O NT_004668AL5904311509023873         11 confirm
S/G/Y/R/B/O NT_004668AL3549801510198473         3 confirm
S/G/Y/R/B/O NT_004668AL1625911510725003         17 confirm
S/G/Y/R/B/O NT_004668AL5920781512716673         6 confirm
S/G/Y/R/B/O NT_004668AL6914881513344263         0 confirm
S/G/Y/R/B/O NT_004668AL6065001513364203         12 confirm
S/G/Y/R/B/O NT_004668AL9543421515074343         3 confirm
S/G/Y/R/B/O NT_004668AL3902041515337763         11 confirm
S/G/Y/R/B/O NT_004668AL4510851516213443         13 confirm
S/G/Y/R/B/O NT_004668AL6914421518015103         6 confirm
S/G/Y/R/B/O NT_004668AL6070671518916053         1 confirm
S/G/Y/R/B/O NT_004668AL7139991519219652         13 confirm
S/G/Y/R/B/O NT_004668AL3537601520529113         1 confirm
S/G/Y/R/B/O NT_004668AL1394101520549053         16 confirm
S/G/Y/R/B/O NT_004668AL3538071522191933         17 confirm
S/G/Y/R/B/O NT_004668BX0886891523962563         2 confirm
S/G/Y/R/B/O NT_004668AL1627341524074923         12 confirm
S/G/Y/R/B/O NT_004668AL1391281525111533         13 confirm
S/G/Y/R/B/O NT_004668AL3553881526559863         16 confirm
S/G/Y/R/B/O NT_004668AL3567341528594493         6 confirm
S/G/Y/R/B/O NT_004668AL1359271528619783         20 confirm
S/G/Y/R/B/O NT_004668AL5896851530241463         15 confirm
S/G/Y/R/B/O NT_004668AL1391301531299653         13 confirm
S/G/Y/R/B/O NT_004668AL1394121531891103         11 confirm
S/G/Y/R/B/O NT_004668AL3651811532385303         19 confirm
S/G/Y/R/B/O NT_004668AL5906661534010423         24 confirm
S/G/Y/R/B/O NT_004668AL1581691535596393         15 confirm
S/G/Y/R/B/O NT_004668AL3561041536574413         14 confirm
S/G/Y/R/B/O NT_004668AL1577131537521343         24 confirm
S/G/Y/R/B/O NT_004668AL3571431539174263         5 confirm
S/G/Y/R/B/O NT_004668AL1389001539623623         23 confirm
S/G/Y/R/B/O NT_004668AL7324061541423873         3 confirm
S/G/Y/R/B/O NT_004668AL3538991541648163         17 confirm
S/G/Y/R/B/O NT_004668AL1359291542985533         15 confirm
S/G/Y/R/B/O NT_004668AL3562761543936993         28 confirm
S/G/Y/R/B/O NT_004668AL1394091545539553         12 confirm
S/G/Y/R/B/O NT_004668AL7723841546174883         3 confirm
S/G/Y/R/B/O NT_004668AL1390101546816363         14 confirm
S/G/Y/R/B/O NT_004668AL1388991548711133         28 confirm


  NT_004668 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004668AL1219861550012503         35 confirm
S/G/Y/R/B/O NT_004668AL3654401551700033         24 confirm
S/G/Y/R/B/O NT_004668AL1602831552968573         9 confirm
S/G/Y/R/B/O NT_004668AL3538941553333093         19 confirm
S/G/Y/R/B/O NT_004668AL5132051554419793         17 confirm
S/G/Y/R/B/O NT_004668AL5132081556229783         7 confirm
S/G/Y/R/B/O NT_004668AL3597531556527943         19 confirm
S/G/Y/R/B/O NT_004668AL4511341558315393         4 confirm
S/G/Y/R/B/O NT_004668AL0354031558768883         24 confirm
S/G/Y/R/B/O NT_004668AL5133231559958393         17 confirm
S/G/Y/R/B/O NT_004668AL6630231561621783         16 confirm
S/G/Y/R/B/O NT_004668AL6067521562462853         19 confirm
S/G/Y/R/B/O NT_004668AL4455281563314193         30 confirm
S/G/Y/R/B/O NT_004668AL5905601565246933         13 confirm
S/G/Y/R/B/O NT_004668AL5134851566595573         9 confirm
S/G/Y/R/B/O NT_004668AL5133021567399553         9 confirm
S/G/Y/R/B/O NT_004668AL1219871567948923         10 confirm
S/G/Y/R/B/O NT_004668AL1390111569617273         6 confirm
S/G/Y/R/B/O NT_004668AL5132821570139203         15 confirm
S/G/Y/R/B/O NT_004668AL4452301570886573         14 confirm
S/G/Y/R/B/O NT_004668AL1389301571890023         34 confirm
S/G/Y/R/B/O NT_004668AL1219851573623883         25 confirm
S/G/Y/R/B/O NT_004668AL3547141575563673         21 confirm
S/G/Y/R/B/O NT_004668AL5918061576956633         17 confirm
S/G/Y/R/B/O NT_004668AL5907141578944853         15 confirm
S/G/Y/R/B/O NT_004668AL5922951580259973         11 confirm
S/G/Y/R/B/O NT_004668AL8317111581841873         3 confirm
S/G/Y/R/B/O NT_004668AL5903851581905613         16 confirm
S/G/Y/R/B/O NT_004668AL3595411583013423         25 confirm
S/G/Y/R/B/O NT_004668AL4509951584579863         1 confirm
S/G/Y/R/B/O NT_004668AL3918251584629953         20 confirm
S/G/Y/R/B/O NT_004668AL5904081586726573         16 confirm
S/G/Y/R/B/O NT_004668AL4501631587741803         24 confirm
S/G/Y/R/B/O NT_004668AL5127851589805883         17 confirm
S/G/Y/R/B/O NT_004668AL3596991590934873         20 confirm
S/G/Y/R/B/O NT_004668AL5963251591993893         24 confirm
S/G/Y/R/B/O NT_004668AL4451971593501593         17 confirm
S/G/Y/R/B/O NT_004668AL3920031594651993         20 confirm
S/G/Y/R/B/O NT_004668AL5838501596550733         15 confirm
S/G/Y/R/B/O NT_004668AL4996161598184023         4 confirm
S/G/Y/R/B/O NT_004668AL4510631598567303         9 confirm
S/G/Y/R/B/O NT_004668AL5924351599233383         18 confirm
S/G/Y/R/B/O NT_004668AL6038411600830173         2 confirm
S/G/Y/R/B/O NT_004668AL5133071601226343         20 confirm
S/G/Y/R/B/O NT_004668AL6631201602891783         1 confirm
S/G/Y/R/B/O NT_004668AL1364571603052033         13 confirm
S/G/Y/R/B/O NT_004668AL6631211603880783         3 confirm
S/G/Y/R/B/O NT_004668AL3558621604061283         9 confirm
S/G/Y/R/B/O NT_004668AL3588751605066533         15 confirm
S/G/Y/R/B/O NT_004668AL5962131606762883         4 confirm


  NT_004668 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004668AL3564281607040733         27 confirm
S/G/Y/R/B/O NT_004668AL3575121608768123         32 confirm
S/G/Y/R/B/O NT_004668AL5133641610588363         18 confirm
S/G/Y/R/B/O NT_004668AL3571321611317873         16 confirm
S/G/Y/R/B/O NT_004668AL3592551612192943         2 confirm
S/G/Y/R/B/O NT_004668AL3910011612381033         31 confirm
S/G/Y/R/B/O NT_004668AL3575681614328693         14 confirm
S/G/Y/R/B/O NT_004668AL3901191615022283         20 confirm
S/G/Y/R/B/O NT_004668AL3600881616977103         13 confirm
S/G/Y/R/B/O NT_004668AL3907301618597233         16 confirm
S/G/Y/R/B/O NT_004668AL5901121619754823         2 confirm
S/G/Y/R/B/O NT_004668AL1600581620086033         17 confirm
S/G/Y/R/B/O NT_004668AL1577141621619723         11 confirm
S/G/Y/R/B/O NT_004668AL3564411622404293         11 confirm
S/G/Y/R/B/O NT_004668AL4510741623143433         17 confirm
S/G/Y/R/B/O NT_004668AL3581151625005603         16 confirm
S/G/Y/R/B/O NT_004668AL6064951625984263         15 confirm
S/G/Y/R/B/O NT_004668AL6267871627173903         13 confirm
S/G/Y/R/B/O NT_004668AL5960871627872753         26 confirm
S/G/Y/R/B/O NT_004668AL3901151629659933         15 confirm
S/G/Y/R/B/O NT_004668AL5838041630665263         23 confirm
S/G/Y/R/B/O NT_004668AL6119621632313683         6 confirm
S/G/Y/R/B/O NT_004668AL3560051633144193         20 confirm
S/G/Y/R/B/O NT_004668AL0086391634308443         11 confirm
S/G/Y/R/B/O NT_004668AL0091821635377213         20 confirm
S/G/Y/R/B/O NT_004668AL1588371636486413         17 confirm
S/G/Y/R/B/O NT_004668AL4510501637973903         13 confirm
S/G/Y/R/B/O NT_004668AL1369841639158063         24 confirm
S/G/Y/R/B/O NT_004668AL3599621640854333         7 confirm
S/G/Y/R/B/O NT_004668AL0317331641506063         22 confirm
S/G/Y/R/B/O NT_004668AL3565321643644673         7 confirm
S/G/Y/R/B/O NT_004668Z999431643890733         13 confirm
S/G/Y/R/B/O NT_004668Z978761645113093         9 confirm
S/G/Y/R/B/O NT_004668AL0312871646135673         7 confirm
S/G/Y/R/B/O NT_004668AL0335311646881963         3 confirm
S/G/Y/R/B/O NT_004668AL0335321647365343         4 confirm
S/G/Y/R/B/O NT_004668AL0213971648180653         6 confirm
S/G/Y/R/B/O NT_004668AL0090511648818813         7 confirm
S/G/Y/R/B/O NT_004668AL0221001649880963         12 confirm
S/G/Y/R/B/O NT_004668AL0237551650815773         5 confirm
S/G/Y/R/B/O NT_004668AL1370751651691913         2 confirm
S/G/Y/R/B/O NT_004668AL0317361651801773         15 confirm
S/G/Y/R/B/O NT_004668AL3565731653273973         1 confirm
S/G/Y/R/B/O NT_004668AL0497981653473423         7 confirm
S/G/Y/R/B/O NT_004668AL0312751654220643         12 confirm
S/G/Y/R/B/O NT_004668AL1359261655317853         12 confirm
S/G/Y/R/B/O NT_004668AL5918621656882053         4 confirm
S/G/Y/R/B/O NT_004668AL0317261657075223         20 confirm
S/G/Y/R/B/O NT_004668Z997581658591473         23 confirm
S/G/Y/R/B/O NT_004668AL3568521659979353         7 confirm


  NT_004668 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_004668AL0210681660526833         14 confirm
S/G/Y/R/B/O NT_004668Z995721661522573         10 confirm
S/G/Y/R/B/O NT_004668AL0221461662587243         11 confirm
S/G/Y/R/B/O NT_004668AL0219401663366493         22 confirm
S/G/Y/R/B/O NT_004668AL0312971664781383         17 confirm
S/G/Y/R/B/O NT_004668AL4451911665812193         0 confirm
S/G/Y/R/B/O NT_004668AL1217141665849963         14 confirm
S/G/Y/R/B/O NT_004668AL3564751666717743         16 confirm
S/G/Y/R/B/O NT_004668AL1624281667798213         1 confirm
S/G/Y/R/B/O NT_004668AL4452031667818153         31 confirm
S/G/Y/R/B/O NT_004668AL3546991669542583         14 confirm
S/G/Y/R/B/O NT_004668AL3547321670337413         26 confirm
S/G/Y/R/B/O NT_004668AL1623991671709843         17 confirm
S/G/Y/R/B/O NT_004668AL0234951672606233         7 confirm
S/G/Y/R/B/O NT_004668Z972001672866083         23 confirm
S/G/Y/R/B/O NT_004668AL0312851674450573         16 confirm
S/G/Y/R/B/O NT_004668AL0319651675713043         7 confirm
S/G/Y/R/B/O NT_004668AL0319651676484183AQ3926821chr1NT_004487AL0210261677463273AQ392679-1CTD-2553D23
S/G/Y/R/B/O NT_004668AL0319651676645123AQ4180251chr1NT_004487AL0210261677300153AQ418023-1RP11-185O7