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  Chromosome 6 - RH Maps - Single Contig
 

Chromosome 6 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007563
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007563AC0695861150946111          
S/G/Y/R/B/O NT_007563AL5130111151019223          
S/G/Y/R/B/O NT_007563AL5918441152591263          
S/G/Y/R/B/O NT_007563AL1369751152894873          
S/G/Y/R/B/O NT_007563Z987551153395163          
S/G/Y/R/B/O NT_007563AL0090291155766613RH927526454.43    1 AL009029
S/G/Y/R/B/O NT_007563AL1219371156480803RH67256454.53  6677.201 AL121937, AL121940
S/G/Y/R/B/O NT_007563AL1219371156480803RH876  64742.00  1 AL121937, AL121940
S/G/Y/R/B/O NT_007563Z992901157520763RH426256454.53    1 Z99290
S/G/Y/R/B/O NT_007563AL0495541157581863          
S/G/Y/R/B/O NT_007563AL5907881158585803          
S/G/Y/R/B/O NT_007563AL5913871159685223          
S/G/Y/R/B/O NT_007563AL5905531159992693          
S/G/Y/R/B/O NT_007563AL5961761161691543          
S/G/Y/R/B/O NT_007563AL5906081161917483          
S/G/Y/R/B/O NT_007563AL0213301163900853          
S/G/Y/R/B/O NT_007563AL5838401164727063          
S/G/Y/R/B/O NT_007563AL0245051166271073CHLC.ATA11D10    6677.301 AL024505
S/G/Y/R/B/O NT_007563AL0245051166331683RH30970  64775.00  1 AL024505
S/G/Y/R/B/O NT_007563AL5132151166956683          
S/G/Y/R/B/O NT_007563AL3596461167388883          
S/G/Y/R/B/O NT_007563AL3575221169019723RH939736450.66    1 AC022038, AL357522
S/G/Y/R/B/O NT_007563AL3569671169443783          
S/G/Y/R/B/O NT_007563AL5904021171292813RH360056459.44    1 AC020592, AL590402
S/G/Y/R/B/O NT_007563AL5904021171295813RH1042606452.60    1 AC020592, AL590402
S/G/Y/R/B/O NT_007563AL5134721171512773          
S/G/Y/R/B/O NT_007563AL3573151172477153RH920236460.82    1 AL357315
S/G/Y/R/B/O NT_007563AL3573151173404373WI-4519    6662.101 AL357315
S/G/Y/R/B/O NT_007563AL1359111173406343          
S/G/Y/R/B/O NT_007563Z953291174898863WI-7445    6679.001 AC025348, Z95329
S/G/Y/R/B/O NT_007563Z953291174982773RH160996452.19    1 AC025348, Z95329
S/G/Y/R/B/O NT_007563AL3567751175589943RH611826452.42  6679.001 AC024292, AL356775
S/G/Y/R/B/O NT_007563AL3567751175591573RH466976457.16    1 AC024292
S/G/Y/R/B/O NT_007563AL3597091175706903RH931446456.24    1 AC024292, AL359709
S/G/Y/R/B/O NT_007563AL1334061176269743RH30971  64817.00  1 AC024292, AL133406
S/G/Y/R/B/O NT_007563AL1334061176788053RH1885  64808.00  1 AC024292, AL133406
S/G/Y/R/B/O NT_007563AL1334061176852933RH611866456.5564808.006679.001 AL133406
S/G/Y/R/B/O NT_007563AL1334061176853483RH466576457.16    1 AL133406
S/G/Y/R/B/O NT_007563AL1334061177234213RH468086457.16    1AL590871, AL133406, AL590871
S/G/Y/R/B/O NT_007563AL1334061177234543RH610976451.18  6685.301AL590871, AL133406, AL590871
S/G/Y/R/B/O NT_007563AL5908711177249363          
S/G/Y/R/B/O NT_007563AL1391911177590193RH158206452.50    1 AL139191
S/G/Y/R/B/O NT_007563AL1391911177599843RH360606460.82    1 AL139191
S/G/Y/R/B/O NT_007563AL1391911177987863RH655196459.92    1 AL139191
S/G/Y/R/B/O NT_007563AL0967941178910263RH694616456.45    1 AC005543, AL096794
S/G/Y/R/B/O NT_007563Z972061179871523RH424716456.45    1 Z97206
S/G/Y/R/B/O NT_007563Z972061179873313RH496  64808.00  1 Z97206
S/G/Y/R/B/O NT_007563Z972061180154053RH1040436456.86    2 Z97206, Z97206
S/G/Y/R/B/O NT_007563Z972061180174313RH1040436456.86    2 Z97206, Z97206
S/G/Y/R/B/O NT_007563AL4503401181019673          


  NT_007563 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007563AL5915181181656733          
S/G/Y/R/B/O NT_007563AL5961121182826943          
S/G/Y/R/B/O NT_007563AC0341421183547021          
S/G/Y/R/B/O NT_007563 - RH367606457.04    2 AC023224
S/G/Y/R/B/O NT_007563 - RH466536456.47    0  
S/G/Y/R/B/O NT_007563 - RH608886457.66    1AL022395, AL022395, L37868