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  Chromosome 6 - RH Maps - Single Contig
 

Chromosome 6 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007540
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007540AC067915729671001          
S/G/Y/R/B/O NT_007540AL049551729747273          
S/G/Y/R/B/O NT_007540AL356135730399643          
S/G/Y/R/B/O NT_007540AL049544731384723RH373176278.50    1 AL049544
S/G/Y/R/B/O NT_007540AL049544731386843RH161156275.15    1 AL049544
S/G/Y/R/B/O NT_007540AL049544731610493RH130966278.50    1 AL049544
S/G/Y/R/B/O NT_007540AL391644732122013          
S/G/Y/R/B/O NT_007540AL133459732777143          
S/G/Y/R/B/O NT_007540AL355347733772803          
S/G/Y/R/B/O NT_007540AL590202734634783          
S/G/Y/R/B/O NT_007540AL360220734669693          
S/G/Y/R/B/O NT_007540AL161440735749133          
S/G/Y/R/B/O NT_007540AL138882736565933          
S/G/Y/R/B/O NT_007540Z93021737320053          
S/G/Y/R/B/O NT_007540AL589682738485903          
S/G/Y/R/B/O NT_007540AL451108739021003          
S/G/Y/R/B/O NT_007540AL355375739458393          
S/G/Y/R/B/O NT_007540AL589736741492403          
S/G/Y/R/B/O NT_007540AL121931742026313          
S/G/Y/R/B/O NT_007540AL590645743362823          
S/G/Y/R/B/O NT_007540AL590558744059313          
S/G/Y/R/B/O NT_007540AL359675745047593          
S/G/Y/R/B/O NT_007540AL450346746136603          
S/G/Y/R/B/O NT_007540AL590456747820273          
S/G/Y/R/B/O NT_007540AL121949748218653          
S/G/Y/R/B/O NT_007540AL390854749620523          
S/G/Y/R/B/O NT_007540AL135905750442663RH177876291.82    1 AC022656, AC023349, AL135905
S/G/Y/R/B/O NT_007540AL135905750442663RH33083  63352.00  1 AC022656, AC023349, AL135905
S/G/Y/R/B/O NT_007540AL135905750775023RH1787  63384.00  1 AC022656, AF051160, AL135905
S/G/Y/R/B/O NT_007540AL135905750776193RH467926289.25    1 AC022656, AC023349, AF051160, AL135905
S/G/Y/R/B/O NT_007540AL135905750864313RH610836299.27  6441.301 AC023349, AF051160, AL135905
S/G/Y/R/B/O NT_007540AL135905750868173RH160886298.97    1 AC023349, AL135905
S/G/Y/R/B/O NT_007540AL135905750883413RH473486300.12    1 AL135905
S/G/Y/R/B/O NT_007540AL135905750893583RH1956  63392.00  1 AC023349, AL135905
S/G/Y/R/B/O NT_007540AL135905750893793RH8755  63392.00  1 AC023349, AL135905
S/G/Y/R/B/O NT_007540AL135905750894553RH467626304.59    1 AC023349, AL135905
S/G/Y/R/B/O NT_007540AL513043751474663RH427356289.75    1 AL513043
S/G/Y/R/B/O NT_007540AL445676751477313          
S/G/Y/R/B/O NT_007540AL050329752179643RH408736290.91    1 AL050329, AL354719
S/G/Y/R/B/O NT_007540AL050329752187413RH161276291.82    1 AL050329, AL354719
S/G/Y/R/B/O NT_007540AL050329752197533RH104416291.31    1 AL050329, AL354719
S/G/Y/R/B/O NT_007540AL050329752210333RH609636297.42  6422.701 AL050329, AL354719
S/G/Y/R/B/O NT_007540AL445677752509253RH1042276291.82    1 AL354719, AL445677
S/G/Y/R/B/O NT_007540AL354913753862913CHLC.GATA64D02    6445.501 AC022949
S/G/Y/R/B/O NT_007540AL590546754384583          
S/G/Y/R/B/O NT_007540AL590784755094202          
S/G/Y/R/B/O NT_007540AL603767756666393          
S/G/Y/R/B/O NT_007540AL078597757605163          
S/G/Y/R/B/O NT_007540AL357375758967253          
S/G/Y/R/B/O NT_007540AL356454759469573          


  NT_007540 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007540AL355357761211903          
S/G/Y/R/B/O NT_007540AL450324762805943RH480186291.84    1 AL450324
S/G/Y/R/B/O NT_007540AL137007763390973          
S/G/Y/R/B/O NT_007540AL109922764447763          
S/G/Y/R/B/O NT_007540AL450394765392613          
S/G/Y/R/B/O NT_007540AL353669765782493          
S/G/Y/R/B/O NT_007540AL133322767512213RH760596304.88    1 AC025050, AC026943, AL133322, AL357502, AL390782
S/G/Y/R/B/O NT_007540AL365217767731183          
S/G/Y/R/B/O NT_007540AL589916768779753          
S/G/Y/R/B/O NT_007540AL132767769101503          
S/G/Y/R/B/O NT_007540AL109612769296473          
S/G/Y/R/B/O NT_007540AL353153770747693RH1036146291.42    1 AL353153
S/G/Y/R/B/O NT_007540AL450319771311503          
S/G/Y/R/B/O NT_007540AL451055772559303          
S/G/Y/R/B/O NT_007540AL391500772974883RH912229154.84    3AC022960, AL138752, AC022960, AC073598, AL138752, AL391500
S/G/Y/R/B/O NT_007540AL391500773405713RH595294494.04  4532.302AC019131, AC019131, AP002028
S/G/Y/R/B/O NT_007540AL391500773406083RH590604494.15  4534.002AC019131, AC019131, AL391500, AP002028
S/G/Y/R/B/O NT_007540AL513492774488263          
S/G/Y/R/B/O NT_007540AL049842775605033          
S/G/Y/R/B/O NT_007540AL132793776393403          
S/G/Y/R/B/O NT_007540AC002485777995923RH423736294.0663467.006445.301 AC002485
S/G/Y/R/B/O NT_007540AC002485777995923RH491  63463.00  1 AC002485
S/G/Y/R/B/O NT_007540AL450164779073003          
S/G/Y/R/B/O NT_007540AL139334780367453CHLC.GATA74F07    6433.201 AL139334
S/G/Y/R/B/O NT_007540AL450336781341613          
S/G/Y/R/B/O NT_007540AL590673782595683          
S/G/Y/R/B/O NT_007540AL590995784483003WI-5706    6439.501 AL590995
S/G/Y/R/B/O NT_007540AL590678784940663          
S/G/Y/R/B/O NT_007540AL590874786419153          
S/G/Y/R/B/O NT_007540AL591004786580073          
S/G/Y/R/B/O NT_007540AL592081788158523          
S/G/Y/R/B/O NT_007540AL591605788178463          
S/G/Y/R/B/O NT_007540AL365503789869443D6S405    6449.301 AC016848, AL365503
S/G/Y/R/B/O NT_007540AL049860790569973          
S/G/Y/R/B/O NT_007540AL512368791533643          
S/G/Y/R/B/O NT_007540AC025085793091051RH608966201.0362955.006301.402AL121969, AC025085, AL121969
S/G/Y/R/B/O NT_007540AC025085793092421RH163396202.63    2AL121969, AL121969
S/G/Y/R/B/O NT_007540AC025085793119741RH266826202.63    2AL121969, AC025085, AL121969
S/G/Y/R/B/O NT_007540AC025085793131911RH639716209.4462944.006303.002AL121969, AC025085, AL121969
S/G/Y/R/B/O NT_007540AC025085793763721RH686776201.19    2AL031178, AC025085, AL031178
S/G/Y/R/B/O NT_007540AC025085794660651RH104736202.70    2AL121969, AC025085, AL121969
S/G/Y/R/B/O NT_007540AC073300793587231          
S/G/Y/R/B/O NT_007540AC108669794864831          
S/G/Y/R/B/O NT_007540 - RH375766297.72    1AC058818, AC058818