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Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008338
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008338AC0111561214298151        
S/G/Y/R/B/O NT_008338AL3548981215801402AFMC010YH59144.809144.131AC011156, AC011156
S/G/Y/R/B/O NT_008338AL3536951216056293        
S/G/Y/R/B/O NT_008338AL3590921217093451AFMC016XH99144.309144.131 AC015497, AL357893, AL357893, AL359092
S/G/Y/R/B/O NT_008338AL1617331218635533        
S/G/Y/R/B/O NT_008338AL5838071220380192        
S/G/Y/R/B/O NT_008338AL3558721221266263        
S/G/Y/R/B/O NT_008338AL1579381221767963        
S/G/Y/R/B/O NT_008338AL3548551223718183        
S/G/Y/R/B/O NT_008338AL3587811224826672        
S/G/Y/R/B/O NT_008338AL1602761226281593        
S/G/Y/R/B/O NT_008338AL1602711227703153        
S/G/Y/R/B/O NT_008338AL6036491229485243        
S/G/Y/R/B/O NT_008338AL7138921230241451        
S/G/Y/R/B/O NT_008338AL6915061230532101        
S/G/Y/R/B/O NT_008338AL5131021230709923        
S/G/Y/R/B/O NT_008338AL3536311232139253        
S/G/Y/R/B/O NT_008338AL1599971233113273AFM248WF19144.809144.671 AL159997
S/G/Y/R/B/O NT_008338AL3537011234141123        
S/G/Y/R/B/O NT_008338AL3547351236566693AFM249YH99144.809144.671 AL354735
S/G/Y/R/B/O NT_008338AL1601651237117003        
S/G/Y/R/B/O NT_008338AL4456451239354023AFMB036XF59145.509145.211 AL445645
S/G/Y/R/B/O NT_008338AL5938511241161213ATA25F10  9145.211 AC000394, AL593851
S/G/Y/R/B/O NT_008338AL1624171241183153