Home    Genome Browser    BLAT Search    Help
  Chromosome 9 - Genetic Maps - Single Contig
 

Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008438
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008438AL445487980814673        
S/G/Y/R/B/O NT_008438AL137852983424451UT1913  9122.231 AL137852
S/G/Y/R/B/O NT_008438AL359552983559073        
S/G/Y/R/B/O NT_008438AL360218984403772        
S/G/Y/R/B/O NT_008438AL389915985797343AFMA238ZF59116.909116.671 AL389915
S/G/Y/R/B/O NT_008438AL162389986708733        
S/G/Y/R/B/O NT_008438AL353137988258903        
S/G/Y/R/B/O NT_008438AL358432989332833        
S/G/Y/R/B/O NT_008438AC011877990286791AFM210ZE79117.009117.371 AC011877, AC068050
S/G/Y/R/B/O NT_008438AL353742990305423        
S/G/Y/R/B/O NT_008438AL137019992210823        
S/G/Y/R/B/O NT_008438AL353766994006243        
S/G/Y/R/B/O NT_008438AL669983995821663        
S/G/Y/R/B/O NT_008438AL358779996408913        
S/G/Y/R/B/O NT_008438AL359692997860003        
S/G/Y/R/B/O NT_008438AL354797998623761        
S/G/Y/R/B/O NT_008438AL6698941000485163        
S/G/Y/R/B/O NT_008438AL3588151001310743AFM320YC59117.809117.371 AL358815
S/G/Y/R/B/O NT_008438AL3599631002464803AFMB074WF99116.809117.371 AC013568, AL359963
S/G/Y/R/B/O NT_008438AL4500251003743563        
S/G/Y/R/B/O NT_008438AL1627331003809592        
S/G/Y/R/B/O NT_008438AL1357891005725443AFM079ZE19117.709117.371 AL135789
S/G/Y/R/B/O NT_008438AL1588291008254213GGAT3G09  9117.371 AL359978
S/G/Y/R/B/O NT_008438AL6272251008344433        
S/G/Y/R/B/O NT_008438AL3538061008364373        
S/G/Y/R/B/O NT_008438AL1588231009454903        
S/G/Y/R/B/O NT_008438AL3535981011190483        
S/G/Y/R/B/O NT_008438AL1581581012825553AFM303TA99120.409120.041 AL158158
S/G/Y/R/B/O NT_008438AL1581581013035293AFMB357YA99120.409120.041 AL158158
S/G/Y/R/B/O NT_008438AL3549821013863513        
S/G/Y/R/B/O NT_008438AL5924631015262493AFM205TG69120.409120.041 AL592463
S/G/Y/R/B/O NT_008438AL5133281017202323GATA23H11  9120.041 AL513328
S/G/Y/R/B/O NT_008438AL1578811017232053        
S/G/Y/R/B/O NT_008438AL4420641018858313        
S/G/Y/R/B/O NT_008438AC0071571020567383AFMA081WD19120.409120.041AL365231, AL365231
S/G/Y/R/B/O NT_008438AL3652311020608783        
S/G/Y/R/B/O NT_008438AL1624141022392643AFMA071ZD19120.409120.041AC011653, AC011653
S/G/Y/R/B/O NT_008438AL3546611022461823        
S/G/Y/R/B/O NT_008438AL1591681024265073MFD178A  9120.041 AL159168
S/G/Y/R/B/O NT_008438AL1357871025747933AFM284VG19120.409120.041 AL135787
S/G/Y/R/B/O NT_008438AL3564911026744093        
S/G/Y/R/B/O NT_008438AL3548771027327593        
S/G/Y/R/B/O NT_008438AL4420661028469953        
S/G/Y/R/B/O NT_008438AL1387561029353053        
S/G/Y/R/B/O NT_008438AL1588241031367903AFMB360XC99120.409120.041 AC073213, AL158824, AL355533
S/G/Y/R/B/O NT_008438AL3590731032697183        
S/G/Y/R/B/O NT_008438AL1627321034297413GATA48D07  9120.042AC016904, AC016904, AL162732
S/G/Y/R/B/O NT_008438AL4451871035197213        
S/G/Y/R/B/O NT_008438AL3900671035957353        
S/G/Y/R/B/O NT_008438AL3602351037079133        


  NT_008438 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008438AL1390411038032703        
S/G/Y/R/B/O NT_008438AL1625881040148913AFM207XA19120.409120.041 AL162588
S/G/Y/R/B/O NT_008438AC0116531040195351        
S/G/Y/R/B/O NT_008438 - AFMB046YD59112.609112.601AC026635, AL512593, AC026635, AL512593