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  Chromosome 9 - Genetic Maps - Single Contig
 

Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_023974
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL357615203801641        
S/G/Y/R/B/O NT_023974AL163528203844021        
S/G/Y/R/B/O NT_023974AL357614203895161        
S/G/Y/R/B/O NT_023974AL445624203948881        
S/G/Y/R/B/O NT_023974AL391667205659273        
S/G/Y/R/B/O NT_023974AL391117206762693        
S/G/Y/R/B/O NT_023974AL645734208342093        
S/G/Y/R/B/O NT_023974AC017067209090903        
S/G/Y/R/B/O NT_023974AL603704210984633        
S/G/Y/R/B/O NT_023974AL583802211377003        
S/G/Y/R/B/O NT_023974AL161730212378263        
S/G/Y/R/B/O NT_023974AL157937214077923        
S/G/Y/R/B/O NT_023974AL354709216241383AFM336YA9936.50937.581 AL354709
S/G/Y/R/B/O NT_023974AL354709216388723AFMA337YH9936.50937.581 AL354709
S/G/Y/R/B/O NT_023974AL449423217170083        
S/G/Y/R/B/O NT_023974AL359922218161633        
S/G/Y/R/B/O NT_023974AL355679219828193        
S/G/Y/R/B/O NT_023974AL137022220905633AFMB325ZH9936.50937.581AC018973, AC018973, AC022041, AL137022
S/G/Y/R/B/O NT_023974AL353732222109483        
S/G/Y/R/B/O NT_023974AL162420223821593        
S/G/Y/R/B/O NT_023974AL512606225046503        
S/G/Y/R/B/O NT_023974AL390882225589571        
S/G/Y/R/B/O NT_023974AL662879227210211        
S/G/Y/R/B/O NT_023974AC018973227275451        
S/G/Y/R/B/O NT_023974AL392163227809343        
S/G/Y/R/B/O NT_023974AL445595229659381        
S/G/Y/R/B/O NT_023974AL354879230792363        
S/G/Y/R/B/O NT_023974AL627410231595063        
S/G/Y/R/B/O NT_023974AL163193231621073        
S/G/Y/R/B/O NT_023974AL513498232817523        
S/G/Y/R/B/O NT_023974AL512635234114153AFMA119ZG9933.30934.421AL513498, AC000007, AL512635, AL513498, AL606844
S/G/Y/R/B/O NT_023974AL442637236518083        
S/G/Y/R/B/O NT_023974AL445623238327233        
S/G/Y/R/B/O NT_023974AL161628239880593        
S/G/Y/R/B/O NT_023974AL365204240984973        
S/G/Y/R/B/O NT_023974AL513317242275883        
S/G/Y/R/B/O NT_023974AL354777243679563        
S/G/Y/R/B/O NT_023974AL161724245187043        
S/G/Y/R/B/O NT_023974AL445241246493713        
S/G/Y/R/B/O NT_023974AL441928246923213        
S/G/Y/R/B/O NT_023974AL162232247994583AFM186XC3942.00942.731 AL162232, AP000379
S/G/Y/R/B/O NT_023974AL353811248251553        
S/G/Y/R/B/O NT_023974AL513333250453633AFM337TB5942.00944.281 AL513333
S/G/Y/R/B/O NT_023974AL157830250464363        
S/G/Y/R/B/O NT_023974AL355975252357073AFMB072ZC1945.00943.511 AL355975
S/G/Y/R/B/O NT_023974AL627260253446623        
S/G/Y/R/B/O NT_023974AL353772254534773        
S/G/Y/R/B/O NT_023974AL158074256683163GATA87E02  944.281 AC018724, AL158074
S/G/Y/R/B/O NT_023974AL353730257236063AFM220ZD4942.00944.281 AL353730
S/G/Y/R/B/O NT_023974AL590322258488473        


  NT_023974 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL391475260055183D9S126  944.281 AC003953, AL391475
S/G/Y/R/B/O NT_023974AL391649261284913        
S/G/Y/R/B/O NT_023974AL353753262850683AFM186XC7945.10947.191 AL353753
S/G/Y/R/B/O NT_023974AL356791264363123GATA165A11  947.191 AL356791
S/G/Y/R/B/O NT_023974AL592226264656423        
S/G/Y/R/B/O NT_023974AL356156265649813        
S/G/Y/R/B/O NT_023974AL590078266935793        
S/G/Y/R/B/O NT_023974AL442639268311441        
S/G/Y/R/B/O NT_023974AL451137269570433        
S/G/Y/R/B/O NT_023974AL356133270637733        
S/G/Y/R/B/O NT_023974AL355432272495781        
S/G/Y/R/B/O NT_023974AL355433273126813        
S/G/Y/R/B/O NT_023974AL133411275052623AFM164XG7948.20949.201 AL133411
S/G/Y/R/B/O NT_023974AL163192275893463        
S/G/Y/R/B/O NT_023974AL451123277280873        
S/G/Y/R/B/O NT_023974AL355585278989633AFM087YD3950.30951.811 AC025611, AL355585
S/G/Y/R/B/O NT_023974AL162396279412353        
S/G/Y/R/B/O NT_023974AL360014281039972AFM212YG1950.30951.811 AL360014
S/G/Y/R/B/O NT_023974AL353746281409723        
S/G/Y/R/B/O NT_023974AL451124283188233        
S/G/Y/R/B/O NT_023974AL596323284811143        
S/G/Y/R/B/O NT_023974AL353683286217713AFM329WC5950.30951.211 AL353683
S/G/Y/R/B/O NT_023974AL353683286715183AFM123XD10950.30951.211 AL353683
S/G/Y/R/B/O NT_023974AL445526287686113AFMA050YH1950.30951.211 AL445526
S/G/Y/R/B/O NT_023974AL592206288940013        
S/G/Y/R/B/O NT_023974AL450428289494983        
S/G/Y/R/B/O NT_023974AL158072290380343MFD121A  951.811 AC025377, AL158072
S/G/Y/R/B/O NT_023974AL158072290473123AFM321XF1951.10951.811 AC025377
S/G/Y/R/B/O NT_023974AL354758292330463        
S/G/Y/R/B/O NT_023974AL360180293255713        
S/G/Y/R/B/O NT_023974AL162388294027043        
S/G/Y/R/B/O NT_023974AL353684295789553MFD110  954.501 AL353684
S/G/Y/R/B/O NT_023974AL138893298263493GATA12C06  954.501 AC022901, AL138893
S/G/Y/R/B/O NT_023974AL354676298437863        
S/G/Y/R/B/O NT_023974AL513132299157263        
S/G/Y/R/B/O NT_023974AL590672301263693AFMB347YH9953.00953.601 AL355584, AL590672
S/G/Y/R/B/O NT_023974AL451045301882423UT5132  954.501 AL355584
S/G/Y/R/B/O NT_023974AL392110302956473GATA137A02  954.501 AL392110
S/G/Y/R/B/O NT_023974AL390883304039493        
S/G/Y/R/B/O NT_023974AL159995304783021        
S/G/Y/R/B/O NT_023974AL353808306413523        
S/G/Y/R/B/O NT_023974AL354704306836143        
S/G/Y/R/B/O NT_023974AL390844308123323        
S/G/Y/R/B/O NT_023974AL590726310860343UT2100  954.501AL353735, AL353735
S/G/Y/R/B/O NT_023974AL353735310867953        
S/G/Y/R/B/O NT_023974AL353745311471293MFD14A  955.251 AL353745
S/G/Y/R/B/O NT_023974AL355582313055153        
S/G/Y/R/B/O NT_023974AL354854314193632        
S/G/Y/R/B/O NT_023974AL353783317107541ATA18C09  951.212AC022092, AC022772, AC022092, AC022772, AL353783
S/G/Y/R/B/O NT_023974AL162728317213623        


  NT_023974 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL590676317285463        
S/G/Y/R/B/O NT_023974 - UT5110  951.211AL353795, AL354669, AL353795, AL354669
S/G/Y/R/B/O NT_023974 - MFD271  954.501AC026932, AL353808, AC026932, AL353808