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  Chromosome 9 - Genetic Maps - Single Contig
 

Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008470
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AC007800907871751        
S/G/Y/R/B/O NT_008470AL136084908519023ATA18A07  9104.481 AL136084
S/G/Y/R/B/O NT_008470AL354923909793113AFM276YE19104.909105.021 AL354923
S/G/Y/R/B/O NT_008470AL162427910776533        
S/G/Y/R/B/O NT_008470AL137067912863233AFM225XF109104.909105.021 AC009830, AC027143, AL137067
S/G/Y/R/B/O NT_008470AL589846913948423UT844  9105.021 AL589846
S/G/Y/R/B/O NT_008470AL162394914605863AFMA136VD19104.909105.021 AL162394
S/G/Y/R/B/O NT_008470AL138835915629123        
S/G/Y/R/B/O NT_008470AL359710916565273        
S/G/Y/R/B/O NT_008470AL358937918305673        
S/G/Y/R/B/O NT_008470AL360084919754563        
S/G/Y/R/B/O NT_008470AL137072920003033        
S/G/Y/R/B/O NT_008470AL356798921711333        
S/G/Y/R/B/O NT_008470AL445214922872013        
S/G/Y/R/B/O NT_008470AL353805923705111AFM200VD69104.909105.021 AL353805
S/G/Y/R/B/O NT_008470AL353805924659951AFMB363XA99104.909105.021 AL353805
S/G/Y/R/B/O NT_008470AL354917924810023        
S/G/Y/R/B/O NT_008470AL390876925922593        
S/G/Y/R/B/O NT_008470AL357293927758303        
S/G/Y/R/B/O NT_008470AL162395928784263        
S/G/Y/R/B/O NT_008470AL357935929392863        
S/G/Y/R/B/O NT_008470AL161631931063333        
S/G/Y/R/B/O NT_008470AL359893933282713AFM294XC99106.509106.631 AL359893
S/G/Y/R/B/O NT_008470AL353621933687793        
S/G/Y/R/B/O NT_008470AL591377935308943        
S/G/Y/R/B/O NT_008470AL356516936720393        
S/G/Y/R/B/O NT_008470AL133413937664391        
S/G/Y/R/B/O NT_008470AL360018939241293        
S/G/Y/R/B/O NT_008470AL596454939430513        
S/G/Y/R/B/O NT_008470AL355588940528013        
S/G/Y/R/B/O NT_008470AL391867941740763        
S/G/Y/R/B/O NT_008470AL137021943384203        
S/G/Y/R/B/O NT_008470AL442644944189783        
S/G/Y/R/B/O NT_008470AL354701945791423        
S/G/Y/R/B/O NT_008470AL450312947085083        
S/G/Y/R/B/O NT_008470AL365396949435923AFM263ZF19109.809109.851 AL365396
S/G/Y/R/B/O NT_008470AL449304949963593AFM291XC59109.809109.851 AL449304
S/G/Y/R/B/O NT_008470AL359679950202473        
S/G/Y/R/B/O NT_008470AL589823952122663GGAA22E01  9110.931 AL589823
S/G/Y/R/B/O NT_008470AL589844952221823        
S/G/Y/R/B/O NT_008470AL390962953781643        
S/G/Y/R/B/O NT_008470AL356576955477343        
S/G/Y/R/B/O NT_008470AL662794955676323        
S/G/Y/R/B/O NT_008470AL590386955871133        
S/G/Y/R/B/O NT_008470AL512639956756233        
S/G/Y/R/B/O NT_008470AL590381958383972        
S/G/Y/R/B/O NT_008470AL161791960188273        
S/G/Y/R/B/O NT_008470AL354938961256483        
S/G/Y/R/B/O NT_008470AL596402963033863        
S/G/Y/R/B/O NT_008470AL512646963053803        


  NT_008470 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AL450426964598403        
S/G/Y/R/B/O NT_008470AL359846965938423        
S/G/Y/R/B/O NT_008470AL353685967897993MFD220  9110.921 AF275948, AF287262
S/G/Y/R/B/O NT_008470AL353685967898103MFD135A  9109.851 AF275948, AF287262
S/G/Y/R/B/O NT_008470AL359182969033623        
S/G/Y/R/B/O NT_008470AL669893969980793        
S/G/Y/R/B/O NT_008470AL591506970868063AFM064XE59110.909110.911 AL591506
S/G/Y/R/B/O NT_008470AL590368972669033AFMA136XA59112.009111.991 AC016666, AL590368
S/G/Y/R/B/O NT_008470AL450265973055783        
S/G/Y/R/B/O NT_008470AL161627973724493        
S/G/Y/R/B/O NT_008470AL158070975111013        
S/G/Y/R/B/O NT_008470AL627247976780063        
S/G/Y/R/B/O NT_008470AL592437977006353        
S/G/Y/R/B/O NT_008470AL592488977521603        
S/G/Y/R/B/O NT_008470AL392084979010043AFM199XF109112.009111.991 AL392084
S/G/Y/R/B/O NT_008470AC036169980137051