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  Chromosome 9 - Genetic Maps - Single Contig
 

Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008413
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008413AL5919683210603        
S/G/Y/R/B/O NT_008413AL1588323950073        
S/G/Y/R/B/O NT_008413AL1617256385563ATA6D06  90.001 AC025306, AL161725
S/G/Y/R/B/O NT_008413AL1617257110993AFM026TG990.1090.001 AC025306, AL161725
S/G/Y/R/B/O NT_008413AL3920897416173        
S/G/Y/R/B/O NT_008413AL1369798913073AFM274XE190.0090.001 AL136979
S/G/Y/R/B/O NT_008413AL13636510165473        
S/G/Y/R/B/O NT_008413AL35897611954533        
S/G/Y/R/B/O NT_008413AL59147413054513        
S/G/Y/R/B/O NT_008413AL35649813274233        
S/G/Y/R/B/O NT_008413AL35893414459903        
S/G/Y/R/B/O NT_008413AL35369615418123        
S/G/Y/R/B/O NT_008413AL35805317234291        
S/G/Y/R/B/O NT_008413AC02205317570921        
S/G/Y/R/B/O NT_008413AL35628417685793        
S/G/Y/R/B/O NT_008413AL35359019491903        
S/G/Y/R/B/O NT_008413AL59164421071173        
S/G/Y/R/B/O NT_008413AL35907622028643        
S/G/Y/R/B/O NT_008413AL13875523397233        
S/G/Y/R/B/O NT_008413AL35366724996613        
S/G/Y/R/B/O NT_008413AL35361426679273        
S/G/Y/R/B/O NT_008413AL45046727870823        
S/G/Y/R/B/O NT_008413AL35472328619433        
S/G/Y/R/B/O NT_008413AL58967531048383MFD141  96.921 AL589675
S/G/Y/R/B/O NT_008413AL35907731276593        
S/G/Y/R/B/O NT_008413AL13354933081653        
S/G/Y/R/B/O NT_008413AL35494134703023        
S/G/Y/R/B/O NT_008413AL60363135613313        
S/G/Y/R/B/O NT_008413AL36520235633253        
S/G/Y/R/B/O NT_008413AL35497737384893        
S/G/Y/R/B/O NT_008413AL35357738999363        
S/G/Y/R/B/O NT_008413AL13707140115633UT685  914.781 AC019305, AL137071
S/G/Y/R/B/O NT_008413AL13707140524593AFM345TA998.3098.371 AC019305, AL137071
S/G/Y/R/B/O NT_008413AL15801241449313AFMA123XG198.8099.831 AC016453
S/G/Y/R/B/O NT_008413AL15801242307763AFM362TD198.8099.831 AC016453, AL158012
S/G/Y/R/B/O NT_008413AL35909542534843        
S/G/Y/R/B/O NT_008413AL13328343145383AFM242XH698.8099.831 AL133283
S/G/Y/R/B/O NT_008413AL13328343268763AFMA312ZH198.3099.831 AL133283
S/G/Y/R/B/O NT_008413AL16241944597062AFMA184WH598.8099.831 AL162419
S/G/Y/R/B/O NT_008413AL16258746110083        
S/G/Y/R/B/O NT_008413AL13623148376823AFM238ZC1912.50914.781 AL136231
S/G/Y/R/B/O NT_008413AL35315150208863AFMA302ZE1910.40912.781 AL353142
S/G/Y/R/B/O NT_008413AL15814750249213        
S/G/Y/R/B/O NT_008413AL51335051951073        
S/G/Y/R/B/O NT_008413AL16145052120753        
S/G/Y/R/B/O NT_008413AL13354753936543GATA62F03  914.231 AL133547
S/G/Y/R/B/O NT_008413AL13354754793003AFMA037YB5916.70918.061 AL133547
S/G/Y/R/B/O NT_008413AL13578654912863        
S/G/Y/R/B/O NT_008413AL16225356477783        
S/G/Y/R/B/O NT_008413AL35474457940053        


  NT_008413 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008413AL13698058428643        
S/G/Y/R/B/O NT_008413AL36536060123263        
S/G/Y/R/B/O NT_008413AL35360661692493        
S/G/Y/R/B/O NT_008413AL16238461989433        
S/G/Y/R/B/O NT_008413AL35374164292183AFMB344ZA9912.50914.781 AL353741
S/G/Y/R/B/O NT_008413AL36022164648253        
S/G/Y/R/B/O NT_008413AL13348064706743        
S/G/Y/R/B/O NT_008413AL35371866602463        
S/G/Y/R/B/O NT_008413AL16241168049923        
S/G/Y/R/B/O NT_008413AL35470768629561        
S/G/Y/R/B/O NT_008413AL44559270497613AFM304TH1913.60915.331 AL445592
S/G/Y/R/B/O NT_008413AL51341270996323        
S/G/Y/R/B/O NT_008413AL13702072503253        
S/G/Y/R/B/O NT_008413AL16144373444563        
S/G/Y/R/B/O NT_008413AL51331374946643AFMB334YD9914.50915.331 AL513313
S/G/Y/R/B/O NT_008413AL15770375082013        
S/G/Y/R/B/O NT_008413AL39187275964793        
S/G/Y/R/B/O NT_008413AL59150977704173        
S/G/Y/R/B/O NT_008413AL35469478752613        
S/G/Y/R/B/O NT_008413AL39198380284853        
S/G/Y/R/B/O NT_008413AL13592381221783GATA175H06  918.061 AL135923
S/G/Y/R/B/O NT_008413AL13592382466243AFM344YC9916.80918.061 AL135923
S/G/Y/R/B/O NT_008413AL13578882601383        
S/G/Y/R/B/O NT_008413AL35777383562413        
S/G/Y/R/B/O NT_008413AL44592683890163        
S/G/Y/R/B/O NT_008413AL59039785632023AFM320TC9916.80918.061 AC026466, AL590397
S/G/Y/R/B/O NT_008413AL13712586142653        
S/G/Y/R/B/O NT_008413AL35658486942333        
S/G/Y/R/B/O NT_008413AL58380588597223        
S/G/Y/R/B/O NT_008413AL45113089474503        
S/G/Y/R/B/O NT_008413AL66990890456783        
S/G/Y/R/B/O NT_008413AL59645190484053        
S/G/Y/R/B/O NT_008413AL35363891769182        
S/G/Y/R/B/O NT_008413AL59113393359853        
S/G/Y/R/B/O NT_008413AL59162294004623        
S/G/Y/R/B/O NT_008413AL35472294884063        
S/G/Y/R/B/O NT_008413AL35373396124523        
S/G/Y/R/B/O NT_008413AL15782697077943        
S/G/Y/R/B/O NT_008413AL39186498567813        
S/G/Y/R/B/O NT_008413AL51342298876013        
S/G/Y/R/B/O NT_008413AL137851100268253        
S/G/Y/R/B/O NT_008413AL441884100654103        
S/G/Y/R/B/O NT_008413AL390723102091563UT7622  921.881 AL390723
S/G/Y/R/B/O NT_008413AL133479102976363        
S/G/Y/R/B/O NT_008413AL590307104650333        
S/G/Y/R/B/O NT_008413AL137069104670271        
S/G/Y/R/B/O NT_008413AL356054106368793        
S/G/Y/R/B/O NT_008413AL135790107025813GATA21A06  921.881 AL135790
S/G/Y/R/B/O NT_008413AL135790107813163AFM158XF12920.40921.881 AL135790
S/G/Y/R/B/O NT_008413AL513024108463223        


  NT_008413 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008413AL161788109252793        
S/G/Y/R/B/O NT_008413AL162413111995262AFM161XD6922.80924.071 AL162413
S/G/Y/R/B/O NT_008413AL354952112345473AFM261ZH9922.80924.071 AL354952
S/G/Y/R/B/O NT_008413AL354992112588043        
S/G/Y/R/B/O NT_008413AL451129114307153        
S/G/Y/R/B/O NT_008413AL355672115066433        
S/G/Y/R/B/O NT_008413AL445586115929143        
S/G/Y/R/B/O NT_008413AL592227117913123        
S/G/Y/R/B/O NT_008413AL513332118448473        
S/G/Y/R/B/O NT_008413AL512596119673783        
S/G/Y/R/B/O NT_008413AL353595119885033        
S/G/Y/R/B/O NT_008413AL596262121541323        
S/G/Y/R/B/O NT_008413AL589678121932713        
S/G/Y/R/B/O NT_008413AL357772123261933        
S/G/Y/R/B/O NT_008413AL162422124866983        
S/G/Y/R/B/O NT_008413AL353605125500093        
S/G/Y/R/B/O NT_008413AL139114126831633        
S/G/Y/R/B/O NT_008413AL138753128152023        
S/G/Y/R/B/O NT_008413AL157828129772533        
S/G/Y/R/B/O NT_008413AL353711131064443AFM248WC9925.10926.241 AL353711
S/G/Y/R/B/O NT_008413AL161449131682603AFM260YA5926.40926.241 AL161449
S/G/Y/R/B/O NT_008413AL161449132493263AFM259YA5925.00926.241 AL161449
S/G/Y/R/B/O NT_008413AL161449132596003UT2420  926.241 AL161449
S/G/Y/R/B/O NT_008413AL353639133230913        
S/G/Y/R/B/O NT_008413AL162386134249133        
S/G/Y/R/B/O NT_008413AL583785136161413AFMA297WE9925.00926.241 AL583785
S/G/Y/R/B/O NT_008413AL354948137005873        
S/G/Y/R/B/O NT_008413AL138750137978653        
S/G/Y/R/B/O NT_008413AL353810138234833        
S/G/Y/R/B/O NT_008413AL158157139328133        
S/G/Y/R/B/O NT_008413AL691508141161231        
S/G/Y/R/B/O NT_008413AL360089141274503        
S/G/Y/R/B/O NT_008413AL441963142567131        
S/G/Y/R/B/O NT_008413AL449443144160893        
S/G/Y/R/B/O NT_008413AL136366144671623AFM333ZB5926.50927.321 AL136366
S/G/Y/R/B/O NT_008413AL137017145476333AFM282ZH9927.80928.421 AL137017
S/G/Y/R/B/O NT_008413AL159169147038503        
S/G/Y/R/B/O NT_008413AL390732147899053        
S/G/Y/R/B/O NT_008413AL512643150004023UT727  927.321 AL512643
S/G/Y/R/B/O NT_008413AL354672150478573        
S/G/Y/R/B/O NT_008413AL592293151111113        
S/G/Y/R/B/O NT_008413AL390958152666853        
S/G/Y/R/B/O NT_008413AL591393153304763        
S/G/Y/R/B/O NT_008413AL390246155033873        
S/G/Y/R/B/O NT_008413AL441925156051373        
S/G/Y/R/B/O NT_008413AL359998156597723        
S/G/Y/R/B/O NT_008413AF199339156610093        
S/G/Y/R/B/O NT_008413AF192524156885261        
S/G/Y/R/B/O NT_008413AC022043157082691        
S/G/Y/R/B/O NT_008413 - GGAA22E10  99.830AL354941, AC015833, AL158161, AL354941


  NT_008413 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008413 - UT764  923.621AL391380, AL391380
S/G/Y/R/B/O NT_008413 - UT873  924.070