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Chromosome 9 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_027081
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_027081AL513423157603543        
S/G/Y/R/B/O NT_027081AL662788159308903        
S/G/Y/R/B/O NT_027081AL359877160352533        
S/G/Y/R/B/O NT_027081AL160052161536223        
S/G/Y/R/B/O NT_027081AL160053163724293AFM339XD9927.90929.521 AL160053
S/G/Y/R/B/O NT_027081AL160053164357603AFMA121YF1929.50930.611 AL160053
S/G/Y/R/B/O NT_027081AL513424165385753AFM051XD6929.50930.611AL449344, AL449344, AL513424
S/G/Y/R/B/O NT_027081AL449344166299791        
S/G/Y/R/B/O NT_027081AL646003166875723        
S/G/Y/R/B/O NT_027081AL449983167524111AFMB307WA5929.50930.611 AL449983
S/G/Y/R/B/O NT_027081AL450003168717033        
S/G/Y/R/B/O NT_027081AL162418170324403        
S/G/Y/R/B/O NT_027081AL450105170882903        
S/G/Y/R/B/O NT_027081AL358117172478073        
S/G/Y/R/B/O NT_027081AL162725173005943        
S/G/Y/R/B/O NT_027081AL354711174418172        
S/G/Y/R/B/O NT_027081AL354738176019433        
S/G/Y/R/B/O NT_027081AL590377176649243        
S/G/Y/R/B/O NT_027081AL133214179216663AFM067XD3931.80932.241 AL133214
S/G/Y/R/B/O NT_027081AL139115179451553        
S/G/Y/R/B/O NT_027081AL645565180931373        
S/G/Y/R/B/O NT_027081AL513502182374461        
S/G/Y/R/B/O NT_027081AL450004182463891        
S/G/Y/R/B/O NT_027081AL513503183479311        
S/G/Y/R/B/O NT_027081AL512664184134963        
S/G/Y/R/B/O NT_027081AL445674185824853GATA124D09  932.241 AL445674
S/G/Y/R/B/O NT_027081AL442638186373633        
S/G/Y/R/B/O NT_027081AL449963188255101        
S/G/Y/R/B/O NT_027081AL353895188859232        
S/G/Y/R/B/O NT_027081AL591423190490863        
S/G/Y/R/B/O NT_027081AL158150191012793        
S/G/Y/R/B/O NT_027081AL356000192672903        
S/G/Y/R/B/O NT_027081AL591206193544673        
S/G/Y/R/B/O NT_027081AL161909194831803        
S/G/Y/R/B/O NT_027081AL391834196184693        
S/G/Y/R/B/O NT_027081AL158206197291823        
S/G/Y/R/B/O NT_027081AL133281199117333AFM191WB4933.30934.421 AL133281
S/G/Y/R/B/O NT_027081AL133281199757653AFM115YB4933.30934.421 AL133281
S/G/Y/R/B/O NT_027081AL158077200512293        
S/G/Y/R/B/O NT_027081AL591222202091211        
S/G/Y/R/B/O NT_027081AC044812202230141