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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004483
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004483AL390880734309051        
S/G/Y/R/B/O NT_004483AC096948734827743        
S/G/Y/R/B/O NT_004483AC103591735927873        
S/G/Y/R/B/O NT_004483AC093118737542613AFMA107YA91107.201104.791 AC093118
S/G/Y/R/B/O NT_004483AL136459737613793        
S/G/Y/R/B/O NT_004483AC096531737812173        
S/G/Y/R/B/O NT_004483AL158841739515033        
S/G/Y/R/B/O NT_004483AL136324740657503GATA193D02  1104.791 AL136324, AL353737
S/G/Y/R/B/O NT_004483AL136324741303553AFMA056XC91109.601105.451 AL136324
S/G/Y/R/B/O NT_004483AL672168741807131        
S/G/Y/R/B/O NT_004483AC104837742156023        
S/G/Y/R/B/O NT_004483AC099674743668673        
S/G/Y/R/B/O NT_004483AL596269745093873        
S/G/Y/R/B/O NT_004483AC098651746335433AFM333ZH91108.801106.451AC093430, AC093430, AC098651
S/G/Y/R/B/O NT_004483AC093430746799151        
S/G/Y/R/B/O NT_004483AC024013747084231        
S/G/Y/R/B/O NT_004483AL122000748206533AFMA113ZG11108.901106.451 AL122000
S/G/Y/R/B/O NT_004483AL353651748800343        
S/G/Y/R/B/O NT_004483AL606527751157613AFM343VF91110.901107.561 AL606527
S/G/Y/R/B/O NT_004483AL627106751500393        
S/G/Y/R/B/O NT_004483AL358533751892833        
S/G/Y/R/B/O NT_004483AL591173752906733        
S/G/Y/R/B/O NT_004483AL360080753669433        
S/G/Y/R/B/O NT_004483AC096532755671181        
S/G/Y/R/B/O NT_004483AC012528755905891        
S/G/Y/R/B/O NT_004483AC103592755943211        
S/G/Y/R/B/O NT_004483AC099769756743581        
S/G/Y/R/B/O NT_004483AC099672757000801        
S/G/Y/R/B/O NT_004483AC012109757059131        
S/G/Y/R/B/O NT_004483AC105279757201473        
S/G/Y/R/B/O NT_004483AC104458758137943        
S/G/Y/R/B/O NT_004483AC099060759433681        
S/G/Y/R/B/O NT_004483AC116315759879001        
S/G/Y/R/B/O NT_004483AC114487760338901        
S/G/Y/R/B/O NT_004483AL451087762380701GGAA10G11  1104.791 AL451087
S/G/Y/R/B/O NT_004483AC026073762496911        
S/G/Y/R/B/O NT_004483AC093575762624273        
S/G/Y/R/B/O NT_004483AC095030765166713AFM338WB51107.201104.791AC019136, AC019136, AC095030, AL500523
S/G/Y/R/B/O NT_004483AC093433771922201AFM154XC71107.201104.791AC073027, AC113935, AC073027, AC093433, AC113935
S/G/Y/R/B/O NT_004483AC019136765788691        
S/G/Y/R/B/O NT_004483AC026932768236261MFD271  954.501AL353808, AC026932, AL353808
S/G/Y/R/B/O NT_004483AC069315767365691        
S/G/Y/R/B/O NT_004483AC024326768615251        
S/G/Y/R/B/O NT_004483AC096951768735473        
S/G/Y/R/B/O NT_004483AL035409769923663GAAT1D9  1104.231AC026874, AC026874, AL035409
S/G/Y/R/B/O NT_004483AC026874770588571        
S/G/Y/R/B/O NT_004483AC113935770618821        
S/G/Y/R/B/O NT_004483AC073027772552761        
S/G/Y/R/B/O NT_004483 - AFM294WG11106.701104.231AC093156, AC093156
S/G/Y/R/B/O NT_004483 - AFM355TH11106.701104.231AL096829, AL096829


  NT_004483 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004483 - AFMB314YC1  1104.231AC009418, AC096950, AC009418, AC096950
S/G/Y/R/B/O NT_004483 - AFM270VC91106.701104.231AC027384, AC027384