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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004610
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004610AL391598187018441        
S/G/Y/R/B/O NT_004610AL031730187043443        
S/G/Y/R/B/O NT_004610AL391883187531763        
S/G/Y/R/B/O NT_004610AL358253188775471        
S/G/Y/R/B/O NT_004610AL645485189758493        
S/G/Y/R/B/O NT_004610AL158172190183273        
S/G/Y/R/B/O NT_004610Z98257191533633AFM343ZA9  146.611 Z98257
S/G/Y/R/B/O NT_004610Z98257191533633AFM343ZA9148.80  1 Z98257
S/G/Y/R/B/O NT_004610AL020998192792893AFMB040YB1150.40148.531 AL020998
S/G/Y/R/B/O NT_004610AL139254193312122        
S/G/Y/R/B/O NT_004610AL391357195547853ATA47D07  146.611 AL391357
S/G/Y/R/B/O NT_004610AL138784196176913        
S/G/Y/R/B/O NT_004610AL606477197681253        
S/G/Y/R/B/O NT_004610AL358392198645172        
S/G/Y/R/B/O NT_004610AL627311199407581        
S/G/Y/R/B/O NT_004610AL672037201059303        
S/G/Y/R/B/O NT_004610AL031005202426083AFM290VB9149.60148.531AL365182, AL031005, AL365182
S/G/Y/R/B/O NT_004610AL031728202514123        
S/G/Y/R/B/O NT_004610AL365182203253491        
S/G/Y/R/B/O NT_004610AC068751203573131        
S/G/Y/R/B/O NT_004610AL592309204456142MFD293  148.531 AC026565, AL391068, AL592309
S/G/Y/R/B/O NT_004610AL359815206043763AFM303TG1150.40148.531 AL357252, AL359815
S/G/Y/R/B/O NT_004610AL590103207917273AFMB016YB5150.40148.531 AL590103
S/G/Y/R/B/O NT_004610AL590556208864482        
S/G/Y/R/B/O NT_004610AL031281210001343        
S/G/Y/R/B/O NT_004610AL445253211295003        
S/G/Y/R/B/O NT_004610AL031279212095293AFM193XB12150.90149.071AL591122, AL031279, AL591122
S/G/Y/R/B/O NT_004610AL591122212785571        
S/G/Y/R/B/O NT_004610AL358788213814983UT5123  149.071AL591122, AL358788, AL591122
S/G/Y/R/B/O NT_004610AL035703215337023AFMA048YH1152.00150.281 AC025929, AL035703
S/G/Y/R/B/O NT_004610AL158086216166541        
S/G/Y/R/B/O NT_004610AL611946216970171        
S/G/Y/R/B/O NT_004610AL512444217426883        
S/G/Y/R/B/O NT_004610AL035704219293723AFMA300WB9154.10152.701 AL035704, AL157403
S/G/Y/R/B/O NT_004610AL355534219812313        
S/G/Y/R/B/O NT_004610AL031428220976633AFM113XC7154.20152.701 AL031428
S/G/Y/R/B/O NT_004610AL161672220995683        
S/G/Y/R/B/O NT_004610AL049576221339873        
S/G/Y/R/B/O NT_004610AL353585222004263        
S/G/Y/R/B/O NT_004610AC068311222248461        
S/G/Y/R/B/O NT_004610 - GGAA30B06  148.530