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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_021979
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021979AC104456936008681AFMB363XF91130.201126.161 AC104456
S/G/Y/R/B/O NT_021979AC104456936023881AFM203VD41130.101126.161 AC104456
S/G/Y/R/B/O NT_021979AC104332929780773        
S/G/Y/R/B/O NT_021979AL133332931171213AFM265XH11130.001126.161AC104332, AC004662, AC104332, AL133332
S/G/Y/R/B/O NT_021979AL162740932425733AFMA051WG91129.901126.161 AL162740
S/G/Y/R/B/O NT_021979AL449283932780043        
S/G/Y/R/B/O NT_021979AC093577934266993AFM350TG91129.801126.161 AC022425
S/G/Y/R/B/O NT_021979AL117354934370063        
S/G/Y/R/B/O NT_021979AL355822935393761        
S/G/Y/R/B/O NT_021979AC095037936196741        
S/G/Y/R/B/O NT_021979AL451010936808311        
S/G/Y/R/B/O NT_021979AL663109938131873        
S/G/Y/R/B/O NT_021979AC023066938284611        
S/G/Y/R/B/O NT_021979AC104836939659001UT851  1128.731 AC104836
S/G/Y/R/B/O NT_021979AL139421940304243AFMB339ZA91129.701126.161AL355822, AL355822
S/G/Y/R/B/O NT_021979AL137159940906153        
S/G/Y/R/B/O NT_021979AC095034941950673        
S/G/Y/R/B/O NT_021979AL512651942270803        
S/G/Y/R/B/O NT_021979AL109613943277443        
S/G/Y/R/B/O NT_021979AC055786944677611        
S/G/Y/R/B/O NT_021979AL359820944732421        
S/G/Y/R/B/O NT_021979AL512488945248633        
S/G/Y/R/B/O NT_021979AL049796945445203        
S/G/Y/R/B/O NT_021979AL117351946683433        
S/G/Y/R/B/O NT_021979AC105278947620431        
S/G/Y/R/B/O NT_021979AC093579947829223        
S/G/Y/R/B/O NT_021979AL162735949393443        
S/G/Y/R/B/O NT_021979AC097059951233563AFM205TA111132.401128.731 AC097059
S/G/Y/R/B/O NT_021979AL356604951796051        
S/G/Y/R/B/O NT_021979AL138758952759733        
S/G/Y/R/B/O NT_021979AC093117953841783        
S/G/Y/R/B/O NT_021979AL391555954975423        
S/G/Y/R/B/O NT_021979AC093429955621053AFM261ZE91132.901129.371 AC025122, AC093429
S/G/Y/R/B/O NT_021979AC093429955803533AFMC015ZC11129.501129.371 AC093429
S/G/Y/R/B/O NT_021979AL359554957059023        
S/G/Y/R/B/O NT_021979AC105942957282941        
S/G/Y/R/B/O NT_021979AC113934958407631        
S/G/Y/R/B/O NT_021979AC095033958849351AFMC026YF11133.001129.371 AC095033
S/G/Y/R/B/O NT_021979AC099787959207201        
S/G/Y/R/B/O NT_021979AC060770960571881        
S/G/Y/R/B/O NT_021979AC091608960906393        
S/G/Y/R/B/O NT_021979AL592205962405793        
S/G/Y/R/B/O NT_021979AL357952963664033        
S/G/Y/R/B/O NT_021979AL357150964612683UT5782  1129.371 AC025706, AL357150
S/G/Y/R/B/O NT_021979AL139347965986443AFMB354XD91133.001129.371 AL139347
S/G/Y/R/B/O NT_021979AL390919966690473        
S/G/Y/R/B/O NT_021979AL136325966713053        
S/G/Y/R/B/O NT_021979AC092393967541773        
S/G/Y/R/B/O NT_021979AC022661968447021        
S/G/Y/R/B/O NT_021979AL139018968742101AFM200WF61133.001129.372AC022661, AC023879, AC022661, AC023879


  NT_021979 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021979AC023879968978691        
S/G/Y/R/B/O NT_021979AC092802969346333        
S/G/Y/R/B/O NT_021979AL139014970979643        
S/G/Y/R/B/O NT_021979AL445218971489983        
S/G/Y/R/B/O NT_021979AL109756972898803AFM164WH21133.001129.371 AL109756
S/G/Y/R/B/O NT_021979AL356479973044923        
S/G/Y/R/B/O NT_021979AC096538974325341        
S/G/Y/R/B/O NT_021979AL604048975121673        
S/G/Y/R/B/O NT_021979AL138780976248603AFM200WF61133.001129.372AC022661, AC023879, AC022661, AC023879
S/G/Y/R/B/O NT_021979AL604047976838833        
S/G/Y/R/B/O NT_021979AL390121977113223        
S/G/Y/R/B/O NT_021979AC099566978617111        
S/G/Y/R/B/O NT_021979AC021191978909251        
S/G/Y/R/B/O NT_021979AC092812978957773        
S/G/Y/R/B/O NT_021979AL683887980566801        
S/G/Y/R/B/O NT_021979 - AFM183YG71129.60  1AC104453, AC104453
S/G/Y/R/B/O NT_021979 - MFD246  1126.161AC114486, AC114486
S/G/Y/R/B/O NT_021979 - UT2069  1126.160