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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_021953
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021953AC0256422209574491        
S/G/Y/R/B/O NT_021953AL5911792225428051AFMA282ZE91244.101240.191 AL591179
S/G/Y/R/B/O NT_021953AC0927652209979321AFMA052ZD11245.201241.261 AL391061
S/G/Y/R/B/O NT_021953AL3600082210278743        
S/G/Y/R/B/O NT_021953AC1035902210318683        
S/G/Y/R/B/O NT_021953AL4454352212429243        
S/G/Y/R/B/O NT_021953AL4510812214466153AFMA058XG91244.10  1 AL451081
S/G/Y/R/B/O NT_021953AL4510812214466153AFMA058XG9  1239.661 AL451081
S/G/Y/R/B/O NT_021953AC0966442214751423UT6125  1240.191 AC096644
S/G/Y/R/B/O NT_021953AC0966402216010431        
S/G/Y/R/B/O NT_021953AC0163142216098591        
S/G/Y/R/B/O NT_021953AL5924062217072083        
S/G/Y/R/B/O NT_021953AL3593532218288093        
S/G/Y/R/B/O NT_021953AL6067262218607243        
S/G/Y/R/B/O NT_021953AL4454232220441933AFMA151YH51242.501238.521 AL445423, AL603862
S/G/Y/R/B/O NT_021953AL3560022220492021        
S/G/Y/R/B/O NT_021953AL4454662221984803ATA24C08  1240.191 AC015608, AL445466, AL603862
S/G/Y/R/B/O NT_021953AL3598332222248863        
S/G/Y/R/B/O NT_021953AL4454702223467803        
S/G/Y/R/B/O NT_021953AL6629282224330123        
S/G/Y/R/B/O NT_021953AL3600132226824913AFMA084YB51244.101240.191 AL360013
S/G/Y/R/B/O NT_021953AL3567882227133213        
S/G/Y/R/B/O NT_021953AL5909662228232663MFD255  1241.261 AL590966
S/G/Y/R/B/O NT_021953AL5924832229001513        
S/G/Y/R/B/O NT_021953AC0155952231205591        
S/G/Y/R/B/O NT_021953AL6064932231284163        
S/G/Y/R/B/O NT_021953AL3561082231695583AFMA043TG11245.701241.801AC015595, AC025642, AC015595, AC025642, AL356108
S/G/Y/R/B/O NT_021953AL1581712232973723        
S/G/Y/R/B/O NT_021953AL5133632233489643GATA194H05  1241.801 AL513363
S/G/Y/R/B/O NT_021953AL5133142234538453        
S/G/Y/R/B/O NT_021953AL5921482235470333AFM284ZD11245.701242.341 AL356431, AL592148
S/G/Y/R/B/O NT_021953AL3921722237806953AFM280ZA51246.201242.341 AL392172
S/G/Y/R/B/O NT_021953AL5135442238959193        
S/G/Y/R/B/O NT_021953AC0931522239092893        
S/G/Y/R/B/O NT_021953AC0211942240587361        
S/G/Y/R/B/O NT_021953 - AFM290WD11246.20  1AL133288, AL512343, AL133288, AL512343
S/G/Y/R/B/O NT_021953 - AFM225XE111246.20  1AC025060, AL356216, AC025060, AL356216, AL591380
S/G/Y/R/B/O NT_021953 - AFMB317WF11246.20  1AC092809, AC092809
S/G/Y/R/B/O NT_021953 - AFM147XF81246.201242.340  
S/G/Y/R/B/O NT_021953 - AFMA204ZH11246.201242.340