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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004982
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004982AC0254031535607421        
S/G/Y/R/B/O NT_004982AL0319651535763843        
S/G/Y/R/B/O NT_004982AL0312851536965453AFM122XA31193.801188.851 AL031285
S/G/Y/R/B/O NT_004982Z972001538085493        
S/G/Y/R/B/O NT_004982AL0234951539669983        
S/G/Y/R/B/O NT_004982AL1623991540336973AFM248WG51193.801188.851 AL162399
S/G/Y/R/B/O NT_004982AL3547321540846221        
S/G/Y/R/B/O NT_004982AL3546991542404671AFM350YH11193.101188.321 AL354699
S/G/Y/R/B/O NT_004982AL4452031543398613        
S/G/Y/R/B/O NT_004982AL1624281545123043        
S/G/Y/R/B/O NT_004982AL3564751545142983        
S/G/Y/R/B/O NT_004982AL1217141546203453        
S/G/Y/R/B/O NT_004982AL4451911547091223        
S/G/Y/R/B/O NT_004982AL0312971547128993        
S/G/Y/R/B/O NT_004982AL0219401548159803        
S/G/Y/R/B/O NT_004982AL0221461549574693        
S/G/Y/R/B/O NT_004982Z995721550353943        
S/G/Y/R/B/O NT_004982AL0210681551418613        
S/G/Y/R/B/O NT_004982AC0680461552434351        
S/G/Y/R/B/O NT_004982AL3568521552465391        
S/G/Y/R/B/O NT_004982Z997581553002093        
S/G/Y/R/B/O NT_004982AL1388991554434013        
S/G/Y/R/B/O NT_004982AL1219861555775373        
S/G/Y/R/B/O NT_004982AL3654401557442713        
S/G/Y/R/B/O NT_004982AL1602831558711253        
S/G/Y/R/B/O NT_004982AL3538941559075773        
S/G/Y/R/B/O NT_004982AL5132051560182473        
S/G/Y/R/B/O NT_004982AL5132081561972423        
S/G/Y/R/B/O NT_004982AL3597531562464941UT6608  1165.621 AB045363, AL359753, AP002534
S/G/Y/R/B/O NT_004982AL4511341564058033        
S/G/Y/R/B/O NT_004982AL0354031565223673AFMA133YE51170.101165.621 AL035403
S/G/Y/R/B/O NT_004982AL5133231565700993        
S/G/Y/R/B/O NT_004982AL6630231567364382        
S/G/Y/R/B/O NT_004982AL6067521568185463        
S/G/Y/R/B/O NT_004982AL4455281569908553UT1234  1165.621 AL359843
S/G/Y/R/B/O NT_004982AL5905601570989543        
S/G/Y/R/B/O NT_004982AL5134851572358163        
S/G/Y/R/B/O NT_004982AL5133021573611873NIB1152  1168.521 AF482710, AL357565, AL513302
S/G/Y/R/B/O NT_004982AL1219871574242721AFMA339WH11172.801168.521 AL121987
S/G/Y/R/B/O NT_004982AL1390111575359033        
S/G/Y/R/B/O NT_004982AL5132821575880963        
S/G/Y/R/B/O NT_004982AL4452301576628333        
S/G/Y/R/B/O NT_004982AL1389301577631783        
S/G/Y/R/B/O NT_004982AL1219851579474673AFMB334XB11172.801168.522AC027082, AC027082, AL121985, AL354714
S/G/Y/R/B/O NT_004982AL1219851581193603AFM297WB91173.901169.681 AL121985, AL354714
S/G/Y/R/B/O NT_004982AC0687281581305431        
S/G/Y/R/B/O NT_004982 - AFMA323XD9  1170.840 AL354714
S/G/Y/R/B/O NT_004982 - MFD3  1170.840