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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_029865
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029865AC026025609574441AFM288ZG1193.80191.892AC096534, AC026025, AC096534, AL390054
S/G/Y/R/B/O NT_029865AL445432609930153        
S/G/Y/R/B/O NT_029865AC096947610233493AFM345XB5193.90191.891 AC096947
S/G/Y/R/B/O NT_029865AC092784610953343        
S/G/Y/R/B/O NT_029865AL445198612129473        
S/G/Y/R/B/O NT_029865AL096888612804643AFMB351XC9195.90193.861 AL096888
S/G/Y/R/B/O NT_029865AL096888613303573AFM286XD9195.80193.861 AL096888
S/G/Y/R/B/O NT_029865AL590393613550363        
S/G/Y/R/B/O NT_029865AC099791613958273AFM120XD4195.90193.861 AC099791
S/G/Y/R/B/O NT_029865AC097064616316111        
S/G/Y/R/B/O NT_029865AC025691616383201        
S/G/Y/R/B/O NT_029865AL449143616971503        
S/G/Y/R/B/O NT_029865AL353802617823233        
S/G/Y/R/B/O NT_029865AL590374619254493        
S/G/Y/R/B/O NT_029865AL136458619836533AFM225ZG7198.10196.041 AC090170, AL136458
S/G/Y/R/B/O NT_029865AL136458620258983AFM197XB6197.40195.311 AC044779, AC090170, AL136458
S/G/Y/R/B/O NT_029865AL162739620599503        
S/G/Y/R/B/O NT_029865AL139343621419463        
S/G/Y/R/B/O NT_029865AC096946622847641        
S/G/Y/R/B/O NT_029865AL451044623437963        
S/G/Y/R/B/O NT_029865AL138847624711663        
S/G/Y/R/B/O NT_029865AC103923625358403        
S/G/Y/R/B/O NT_029865AL391842627194631        
S/G/Y/R/B/O NT_029865AC099794627508663AFM323XA9198.10196.041 AC099794
S/G/Y/R/B/O NT_029865AL162400629765903AFMA140YH1198.10196.041 AC026144, AL162400
S/G/Y/R/B/O NT_029865AC096543629917933        
S/G/Y/R/B/O NT_029865AL138935631526303        
S/G/Y/R/B/O NT_029865AL049636632403723AFM220YC7198.20196.041 AL049636
S/G/Y/R/B/O NT_029865AL592218633028203        
S/G/Y/R/B/O NT_029865AL591362633402031        
S/G/Y/R/B/O NT_029865AL109925634108083        
S/G/Y/R/B/O NT_029865AL512663635633913        
S/G/Y/R/B/O NT_029865AL161742636365623        
S/G/Y/R/B/O NT_029865AL353713637623693AFMA152YG9199.40197.491 AC025544, AL353713, AL356914
S/G/Y/R/B/O NT_029865AL353713638260093GATA28F10  197.491 AL353713
S/G/Y/R/B/O NT_029865AL359769638315091        
S/G/Y/R/B/O NT_029865AC018773638930651AFMA112ZD5199.20198.211AL359769, AC018773, AL359769
S/G/Y/R/B/O NT_029865AL138793639745853        
S/G/Y/R/B/O NT_029865AL445205639975323AFMA273ZB11100.60198.211 AL445205
S/G/Y/R/B/O NT_029865AL445205640873983AFMA346WE51100.50198.211 AL445205
S/G/Y/R/B/O NT_029865AL161916641011643        
S/G/Y/R/B/O NT_029865AL592184642003133        
S/G/Y/R/B/O NT_029865AL513044642205643        
S/G/Y/R/B/O NT_029865AL355515643304653        
S/G/Y/R/B/O NT_029865AL590405644336743        
S/G/Y/R/B/O NT_029865AC099678645654983ATA52G05  198.211 AC099678
S/G/Y/R/B/O NT_029865AC099678646534523AFMB301XD11100.80198.211AC093427, AC093427, AC099678
S/G/Y/R/B/O NT_029865AC093427647501813AFM292ZF51100.90198.211 AC093427, AL354878
S/G/Y/R/B/O NT_029865AL590436647853353        
S/G/Y/R/B/O NT_029865AL606517648065523        


  NT_029865 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029865AC025866648790821        
S/G/Y/R/B/O NT_029865AL357078649318791AFMA070WD9199.30198.211AC025866, AC025866, AL357078
S/G/Y/R/B/O NT_029865AC099680650226043        
S/G/Y/R/B/O NT_029865AL356212651116603        
S/G/Y/R/B/O NT_029865AL139294651410633