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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004464
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004464AL691520691739921UT5492  1102.021AC031997, AC031997, AL583851, AL645475, AL691520
S/G/Y/R/B/O NT_004464AC031997692257161        
S/G/Y/R/B/O NT_004464AL356106692853503        
S/G/Y/R/B/O NT_004464AL358854693378293        
S/G/Y/R/B/O NT_004464AL512271694209373        
S/G/Y/R/B/O NT_004464AL157406695716283AFM161XB21103.301101.481 AC021495
S/G/Y/R/B/O NT_004464AL359894697853203AFM016XH31103.801101.481 AL139153, AL359894
S/G/Y/R/B/O NT_004464AL117353698338703        
S/G/Y/R/B/O NT_004464AL359412699472853        
S/G/Y/R/B/O NT_004464AL391728700096702        
S/G/Y/R/B/O NT_004464AL158840701594653        
S/G/Y/R/B/O NT_004464AL157948702471303        
S/G/Y/R/B/O NT_004464AL353771703954973AFMB359XE91104.301102.021 AC019213
S/G/Y/R/B/O NT_004464AL353771704009743AFM126XA11103.201101.481 AC019213, AL353771
S/G/Y/R/B/O NT_004464AL353771704506723AFMA102WF91104.301102.021 AC019213
S/G/Y/R/B/O NT_004464AL354721704696123        
S/G/Y/R/B/O NT_004464AL158839705246823        
S/G/Y/R/B/O NT_004464AL354872706351663AFM359TB51104.301102.021 AC026545
S/G/Y/R/B/O NT_004464AL592104707405703        
S/G/Y/R/B/O NT_004464AL513285708720593        
S/G/Y/R/B/O NT_004464AL662898709680373        
S/G/Y/R/B/O NT_004464AL158087709713303        
S/G/Y/R/B/O NT_004464AL031429711775423UT2062  1101.481 AL031429
S/G/Y/R/B/O NT_004464AL031429712168613AFM051XH81104.301102.021 AL031429
S/G/Y/R/B/O NT_004464AL512443712532403        
S/G/Y/R/B/O NT_004464AL360297713586363AFMA099WC11104.301102.021 AL360297
S/G/Y/R/B/O NT_004464AL358453714747343        
S/G/Y/R/B/O NT_004464AL627317715816693        
S/G/Y/R/B/O NT_004464AL354949716733023        
S/G/Y/R/B/O NT_004464AL355590718708541AFM179YG31104.301102.021 AL355590
S/G/Y/R/B/O NT_004464AL359821718856453        
S/G/Y/R/B/O NT_004464AL356600720035963        
S/G/Y/R/B/O NT_004464AL391239721330533        
S/G/Y/R/B/O NT_004464AL645767722054213        
S/G/Y/R/B/O NT_004464AL513349722371393        
S/G/Y/R/B/O NT_004464AL365362723847273        
S/G/Y/R/B/O NT_004464AL645724724750673        
S/G/Y/R/B/O NT_004464AL512292724840883        
S/G/Y/R/B/O NT_004464AL365254726174853        
S/G/Y/R/B/O NT_004464AL513166729339173AFM319ZH91104.301102.021 AL513166
S/G/Y/R/B/O NT_004464AL139149729420113        
S/G/Y/R/B/O NT_004464AL583808729619693        
S/G/Y/R/B/O NT_004464 - UT7726  1102.020  
S/G/Y/R/B/O NT_004464 - GATA61A06  1102.021AL591463, AL591463
S/G/Y/R/B/O NT_004464 - GATA152F05  1102.021AL591463, AL591463