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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004302
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004302AL606535773221883        
S/G/Y/R/B/O NT_004302AL606463774420023        
S/G/Y/R/B/O NT_004302AL391297775993063        
S/G/Y/R/B/O NT_004302AC105273777103461        
S/G/Y/R/B/O NT_004302AC026490777396051        
S/G/Y/R/B/O NT_004302AL590092778162463        
S/G/Y/R/B/O NT_004302AC091615778482923        
S/G/Y/R/B/O NT_004302AC105269779326183        
S/G/Y/R/B/O NT_004302AL591463780053543GATA152F05  1102.021 AL591463
S/G/Y/R/B/O NT_004302AL591463780503773GATA61A06  1102.021 AL591463
S/G/Y/R/B/O NT_004302AL359200781218503        
S/G/Y/R/B/O NT_004302AC090530781837891        
S/G/Y/R/B/O NT_004302AC023198782392361        
S/G/Y/R/B/O NT_004302AL359205782481173        
S/G/Y/R/B/O NT_004302AC098692784175513        
S/G/Y/R/B/O NT_004302AL354708784915531        
S/G/Y/R/B/O NT_004302AC018404785214881        
S/G/Y/R/B/O NT_004302AC093158785950353        
S/G/Y/R/B/O NT_004302AC105271786831651        
S/G/Y/R/B/O NT_004302AC073887786860921        
S/G/Y/R/B/O NT_004302AC013557786972221        
S/G/Y/R/B/O NT_004302AC019177787799041        
S/G/Y/R/B/O NT_004302AC098691787927471        
S/G/Y/R/B/O NT_004302AL355871788454373        
S/G/Y/R/B/O NT_004302AC021075789809433        
S/G/Y/R/B/O NT_004302AC027623790397891        
S/G/Y/R/B/O NT_004302AC034169790427651        
S/G/Y/R/B/O NT_004302AL714022790440401        
S/G/Y/R/B/O NT_004302AC058795790696121        
S/G/Y/R/B/O NT_004302AC015897791561971        
S/G/Y/R/B/O NT_004302AC019284792722231AFMB314YC11106.601104.231AC009418, AC096950, AC009418, AC096950
S/G/Y/R/B/O NT_004302AC096950792743913        
S/G/Y/R/B/O NT_004302AC009418793184331        
S/G/Y/R/B/O NT_004302AL359969793357581        
S/G/Y/R/B/O NT_004302AC091611793494633        
S/G/Y/R/B/O NT_004302AC099334795784913        
S/G/Y/R/B/O NT_004302AL445992796575033        
S/G/Y/R/B/O NT_004302AL162263796924563ATA2E04  1125.511 AL162263, AL590555
S/G/Y/R/B/O NT_004302AL390780797617833        
S/G/Y/R/B/O NT_004302AC024195798208791        
S/G/Y/R/B/O NT_004302AC114486799749261MFD246  1126.161 AC114486
S/G/Y/R/B/O NT_004302AL355573799995071        
S/G/Y/R/B/O NT_004302AC023379800273001        
S/G/Y/R/B/O NT_004302AC099786800657913        
S/G/Y/R/B/O NT_004302AL357732802446931        
S/G/Y/R/B/O NT_004302AC073499802515321        
S/G/Y/R/B/O NT_004302AC107627803382923AFM270VC91106.701104.231AC027384, AC027384
S/G/Y/R/B/O NT_004302AC053498803460251        
S/G/Y/R/B/O NT_004302AC027384803742131        
S/G/Y/R/B/O NT_004302AC093156804861613AFM294WG11106.701104.231 AC093156


  NT_004302 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004302AL096829806873473AFM355TH11106.701104.231 AL096829
S/G/Y/R/B/O NT_004302AL137803807292683        
S/G/Y/R/B/O NT_004302AL357314807869833        
S/G/Y/R/B/O NT_004302AL445464808965493        
S/G/Y/R/B/O NT_004302AC092813809976463        
S/G/Y/R/B/O NT_004302AC012517811781751