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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004873
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004873AL603890122891143        
S/G/Y/R/B/O NT_004873AL603749124503853GATA27E01  129.931 AC019262, AL451066, AL603749
S/G/Y/R/B/O NT_004873AL354712124782333        
S/G/Y/R/B/O NT_004873AL359771126525433AFM196XB4132.40129.931 AL359771
S/G/Y/R/B/O NT_004873AL583942127086403        
S/G/Y/R/B/O NT_004873AL031277128310873UT1987  131.021 AL031277
S/G/Y/R/B/O NT_004873AL031273128630143        
S/G/Y/R/B/O NT_004873AL033525129198733        
S/G/Y/R/B/O NT_004873Z99291131306833AFM321ZB9133.20131.021 AL359086, Z99291
S/G/Y/R/B/O NT_004873AL357873131811823        
S/G/Y/R/B/O NT_004873AL359873133226903        
S/G/Y/R/B/O NT_004873AL161427134074353        
S/G/Y/R/B/O NT_004873AL358793135203403UT2127  133.751 AL358793
S/G/Y/R/B/O NT_004873AL034395135749593        
S/G/Y/R/B/O NT_004873AL031732136949303AFMA127ZC9136.20133.751 AL031732
S/G/Y/R/B/O NT_004873AL031293138264423AFMB032ZE1136.20133.751 AL031293
S/G/Y/R/B/O NT_004873AL445263138759873UT1441  133.751 AL391866
S/G/Y/R/B/O NT_004873AL391215139448663AFMA232ZB9136.20133.751 AC055792, AL391215, AL391866
S/G/Y/R/B/O NT_004873AL035405140354243        
S/G/Y/R/B/O NT_004873AL391094142023573        
S/G/Y/R/B/O NT_004873AL158174142460273        
S/G/Y/R/B/O NT_004873AL031283142751373        
S/G/Y/R/B/O NT_004873AL512883144491003        
S/G/Y/R/B/O NT_004873AL121992145367463AFM217ZC3139.90137.051 AC009056, AL121992
S/G/Y/R/B/O NT_004873AL606758146990093        
S/G/Y/R/B/O NT_004873AL450998147175503        
S/G/Y/R/B/O NT_004873AL034555148786583        
S/G/Y/R/B/O NT_004873AL096775150209043AFMA298YC5139.90137.051 AL096775
S/G/Y/R/B/O NT_004873AL451042150396973        
S/G/Y/R/B/O NT_004873AL109627151257953        
S/G/Y/R/B/O NT_004873AL358794152446133        
S/G/Y/R/B/O NT_004873AL669962153675623        
S/G/Y/R/B/O NT_004873AL137802153744793        
S/G/Y/R/B/O NT_004873AC015618154606551        
S/G/Y/R/B/O NT_004873AL713858154866511        
S/G/Y/R/B/O NT_004873AL137798155219553        
S/G/Y/R/B/O NT_004873AL021920156680963        
S/G/Y/R/B/O NT_004873AC021338157550971        
S/G/Y/R/B/O NT_004873 - UT7498  135.401AL031296, AL031296