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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004636
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004636AC069172656833711        
S/G/Y/R/B/O NT_004636AL513493658160693        
S/G/Y/R/B/O NT_004636AL592285659798493        
S/G/Y/R/B/O NT_004636AL590783661319623        
S/G/Y/R/B/O NT_004636AL591487662873183        
S/G/Y/R/B/O NT_004636AL357273663045323        
S/G/Y/R/B/O NT_004636AL109926663747793        
S/G/Y/R/B/O NT_004636AL359701664870773        
S/G/Y/R/B/O NT_004636AL356913666677053AFM074ZA51102.00199.301 AC016508, AL356913
S/G/Y/R/B/O NT_004636AL391820666877253        
S/G/Y/R/B/O NT_004636AL139147667448703        
S/G/Y/R/B/O NT_004636AL354978668403241        
S/G/Y/R/B/O NT_004636AC026063668573781        
S/G/Y/R/B/O NT_004636AL592161669343713        
S/G/Y/R/B/O NT_004636AL139216669792343        
S/G/Y/R/B/O NT_004636AL500525670897493        
S/G/Y/R/B/O NT_004636AL133320671250553        
S/G/Y/R/B/O NT_004636AL109843672543003        
S/G/Y/R/B/O NT_004636AL389925673689133        
S/G/Y/R/B/O NT_004636AL358512675242912AFMC006XB51103.101100.391 AL358512
S/G/Y/R/B/O NT_004636AL590559675326633        
S/G/Y/R/B/O NT_004636AL359268676833143        
S/G/Y/R/B/O NT_004636AL139258676958403        
S/G/Y/R/B/O NT_004636AL136120677952273UT2341  1100.391 AC046169, AL136120
S/G/Y/R/B/O NT_004636AL136120678876403UT415  1100.391 AL136120, AL391871
S/G/Y/R/B/O NT_004636AL499611678964073        
S/G/Y/R/B/O NT_004636AL391703679086423AFM303VC51103.201100.391 AC046169, AL391703
S/G/Y/R/B/O NT_004636AL157407680952833        
S/G/Y/R/B/O NT_004636AC010986682356801        
S/G/Y/R/B/O NT_004636AL513284682499463        
S/G/Y/R/B/O NT_004636 - UT2152  1100.391AL139149, AC073380, AL139149