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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_021905
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021905AL3590901917341471        
S/G/Y/R/B/O NT_021905AL3652081917402571        
S/G/Y/R/B/O NT_021905AL3597021918395451AFM234WF61225.101220.651 AL359702
S/G/Y/R/B/O NT_021905AC0989341917682471        
S/G/Y/R/B/O NT_021905AC0966321920289131        
S/G/Y/R/B/O NT_021905AL7139651920290551        
S/G/Y/R/B/O NT_021905AL4510081920800652        
S/G/Y/R/B/O NT_021905AC0965331921336181        
S/G/Y/R/B/O NT_021905AL3571311949558091AFM024XF81224.601220.651 AL357131
S/G/Y/R/B/O NT_021905AL4510821926479343AFMA272XD91220.701216.821AC105940, AC105940, AL451082
S/G/Y/R/B/O NT_021905AC1059401926582003        
S/G/Y/R/B/O NT_021905AL5133261928226093        
S/G/Y/R/B/O NT_021905AL3598371928558363AFMB314WF91220.901216.821 AL359837
S/G/Y/R/B/O NT_021905AC0220001929796911        
S/G/Y/R/B/O NT_021905AC0966761930004521        
S/G/Y/R/B/O NT_021905AL5133431931048162GGAA23C07  1218.461AC096676, AC096676, AL390207, AL513343
S/G/Y/R/B/O NT_021905AL5133431931679712AFMA132YC91223.001218.461 AL513343
S/G/Y/R/B/O NT_021905AC1144021932327221        
S/G/Y/R/B/O NT_021905AL4459831933995951        
S/G/Y/R/B/O NT_021905AC0966451935418091AFM312YB51224.601219.921 AC096645
S/G/Y/R/B/O NT_021905AC0732511936016501        
S/G/Y/R/B/O NT_021905AL5921461936332923AFMB002ZG51222.901218.461AC073251, AC073251, AL592146
S/G/Y/R/B/O NT_021905AL5921461936541533AFMA224XC11222.801218.461 AF149301
S/G/Y/R/B/O NT_021905AL5921141937028481        
S/G/Y/R/B/O NT_021905AL6272021937386891        
S/G/Y/R/B/O NT_021905AC0483691938939151        
S/G/Y/R/B/O NT_021905AL6064891939001451        
S/G/Y/R/B/O NT_021905AL5123061940563483        
S/G/Y/R/B/O NT_021905AL1617931942192711AFMA123YF11222.701218.461 AL355486
S/G/Y/R/B/O NT_021905AC0966751943995123AFMA052ZD51224.601220.651 AC096675
S/G/Y/R/B/O NT_021905AL3918221944564273        
S/G/Y/R/B/O NT_021905AL5838321945919072AFMB334ZB11224.501219.921AC018373, AC018373, AL583832
S/G/Y/R/B/O NT_021905AC0187111946707773        
S/G/Y/R/B/O NT_021905AC0989331948381111        
S/G/Y/R/B/O NT_021905AC0183731948750701        
S/G/Y/R/B/O NT_021905AC0989361950322611        
S/G/Y/R/B/O NT_021905AL6915151951841261        
S/G/Y/R/B/O NT_021905AC0165391953392061        
S/G/Y/R/B/O NT_021905AL7138731953392121        
S/G/Y/R/B/O NT_021905AL5963261955115052GATA51H01  1204.511 AC048365, AL596206, AL596326
S/G/Y/R/B/O NT_021905AL5132131956595463        
S/G/Y/R/B/O NT_021905AL3652071956615403        
S/G/Y/R/B/O NT_021905AL3562911958625243AFMA057VB51209.901205.401 AL356291
S/G/Y/R/B/O NT_021905AL3594351959362293AFM123YC71208.901204.511 AL359435
S/G/Y/R/B/O NT_021905AL3594351959831773AFM206XD61208.901204.511 AC026892, AL359435
S/G/Y/R/B/O NT_021905AL1617961960781203AFM310XH91208.901205.401 AC040890
S/G/Y/R/B/O NT_021905AL1363711960812983        
S/G/Y/R/B/O NT_021905AL3579741962270823        
S/G/Y/R/B/O NT_021905AL5915041963201443        
S/G/Y/R/B/O NT_021905AL3599761964687433        


  NT_021905 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021905AL3654021966354613UT7117  1205.401 AL365402
S/G/Y/R/B/O NT_021905AL3547711966937843        
S/G/Y/R/B/O NT_021905AL3916451968419793        
S/G/Y/R/B/O NT_021905AL1588381970134443AFM290VA91208.901205.401 AC026654, AL158838
S/G/Y/R/B/O NT_021905AL1588381971088333UT593  1205.401 AL158838
S/G/Y/R/B/O NT_021905AL3547251971440413        
S/G/Y/R/B/O NT_021905AL1391351971460353        
S/G/Y/R/B/O NT_021905AL3910981973099543        
S/G/Y/R/B/O NT_021905AL1389271974161093        
S/G/Y/R/B/O NT_021905AC0110411975792761        
S/G/Y/R/B/O NT_021905AC0125811976135881        
S/G/Y/R/B/O NT_021905AC0743641976195741