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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004852
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004852AC053509393245561        
S/G/Y/R/B/O NT_004852AL391730393317751        
S/G/Y/R/B/O NT_004852AC093151405765331GATA129H04  172.591 AC093151, AL663046
S/G/Y/R/B/O NT_004852AC093151406248411GATA65H06  172.591 AC093151
S/G/Y/R/B/O NT_004852AL512599394176371        
S/G/Y/R/B/O NT_004852AL356424395790663        
S/G/Y/R/B/O NT_004852AL050341396340803AFMB077WG9  170.411 AL050341
S/G/Y/R/B/O NT_004852AL050341396340803AFMB077WG9171.00  1 AL050341
S/G/Y/R/B/O NT_004852AL031985397122213        
S/G/Y/R/B/O NT_004852AL603839398598023AFMA130VH9172.20171.131 AL603839
S/G/Y/R/B/O NT_004852AL356379399143363        
S/G/Y/R/B/O NT_004852AL031289399914783AFMA337WC1172.20171.131 AL031289
S/G/Y/R/B/O NT_004852AL354914401072461        
S/G/Y/R/B/O NT_004852AL158843402640321UT7056  170.411 AL158843
S/G/Y/R/B/O NT_004852AL158843402987481UT862  172.591 AL158843
S/G/Y/R/B/O NT_004852AL110502404036803AFM200WH8173.70172.591 AL110502
S/G/Y/R/B/O NT_004852AL606484404828063        
S/G/Y/R/B/O NT_004852AL445933406812793        
S/G/Y/R/B/O NT_004852AL157905408334371        
S/G/Y/R/B/O NT_004852AL451006410347783AFMA155TG1174.30173.211 AC013579, AL451006
S/G/Y/R/B/O NT_004852AL356455410819663        
S/G/Y/R/B/O NT_004852AC105268411119931        
S/G/Y/R/B/O NT_004852AC008022412589621        
S/G/Y/R/B/O NT_004852AL158216412909423AFM154XG11174.30173.211AC008022, AC008022, AL158216
S/G/Y/R/B/O NT_004852AC114492413518261        
S/G/Y/R/B/O NT_004852AC096540415553751ACT1B03A  173.211 AC096540, AL359754
S/G/Y/R/B/O NT_004852AL513331415578741        
S/G/Y/R/B/O NT_004852AL445669417974233AFM057XF4173.80173.211 AL445669
S/G/Y/R/B/O NT_004852AL138788418232791        
S/G/Y/R/B/O NT_004852AC098484419270393        
S/G/Y/R/B/O NT_004852AL512353420582161        
S/G/Y/R/B/O NT_004852AC023331420615331        
S/G/Y/R/B/O NT_004852AC099795421528331        
S/G/Y/R/B/O NT_004852 - AFM092XD11173.70172.590AL138788, AL138788