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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004424
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004424AL356977482498441        
S/G/Y/R/B/O NT_004424AC099677482662621        
S/G/Y/R/B/O NT_004424AC099796482867181        
S/G/Y/R/B/O NT_004424AC025990483280521        
S/G/Y/R/B/O NT_004424AL445183484613083        
S/G/Y/R/B/O NT_004424AL606760486550823        
S/G/Y/R/B/O NT_004424AL606523487739723        
S/G/Y/R/B/O NT_004424AC093564488502331AFMA132WA9  170.411 AC093564
S/G/Y/R/B/O NT_004424AL365445488661773        
S/G/Y/R/B/O NT_004424AC105280489305201        
S/G/Y/R/B/O NT_004424AC069175490032151        
S/G/Y/R/B/O NT_004424AL603915490413503        
S/G/Y/R/B/O NT_004424AL591720490518093        
S/G/Y/R/B/O NT_004424AL049745492063003        
S/G/Y/R/B/O NT_004424AL391003493217931        
S/G/Y/R/B/O NT_004424AL031427493488233AFMA203YE9180.20178.251 AL031427
S/G/Y/R/B/O NT_004424AL353898494856923        
S/G/Y/R/B/O NT_004424AL161915495829673        
S/G/Y/R/B/O NT_004424AL357673496046932        
S/G/Y/R/B/O NT_004424AL354778497356091        
S/G/Y/R/B/O NT_004424AL035415498115763        
S/G/Y/R/B/O NT_004424AL356458500119213        
S/G/Y/R/B/O NT_004424AL591415501276763        
S/G/Y/R/B/O NT_004424AC013447502358963        
S/G/Y/R/B/O NT_004424AC096541503815551GATA72H07  175.661 AC096541
S/G/Y/R/B/O NT_004424AL451079504757661        
S/G/Y/R/B/O NT_004424AL356289506299863        
S/G/Y/R/B/O NT_004424AL109659506698683        
S/G/Y/R/B/O NT_004424AL359959508630793AFM291VH5177.60175.661AC055887, AC055887, AL359959
S/G/Y/R/B/O NT_004424AC055887508943961        
S/G/Y/R/B/O NT_004424AC055886508980411        
S/G/Y/R/B/O NT_004424AL356968510730461        
S/G/Y/R/B/O NT_004424AL391844513266123GGAT4C11  173.811 AL389920, AL391844
S/G/Y/R/B/O NT_004424AL355809513788373        
S/G/Y/R/B/O NT_004424AC097062515527683AFMB015WC9177.40175.661 AC097062
S/G/Y/R/B/O NT_004424AL645507516480443        
S/G/Y/R/B/O NT_004424AC099788517487873        
S/G/Y/R/B/O NT_004424AC092264518954663        
S/G/Y/R/B/O NT_004424AL590432519689073        
S/G/Y/R/B/O NT_004424AL031294520537523        
S/G/Y/R/B/O NT_004424AL356916521357093        
S/G/Y/R/B/O NT_004424AL445527522526203        
S/G/Y/R/B/O NT_004424AL356789522607423        
S/G/Y/R/B/O NT_004424AL390023523597443        
S/G/Y/R/B/O NT_004424AC105766524908813        
S/G/Y/R/B/O NT_004424AL591602526796123AFMB286XH9177.60175.661 AL591602
S/G/Y/R/B/O NT_004424AL645730527249323        
S/G/Y/R/B/O NT_004424AL139255528767343        
S/G/Y/R/B/O NT_004424AC099784528963751        
S/G/Y/R/B/O NT_004424AL356976530584571        


  NT_004424 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004424AC073923530857071        
S/G/Y/R/B/O NT_004424AL591167531304913        
S/G/Y/R/B/O NT_004424AL138849531886763        
S/G/Y/R/B/O NT_004424AL513218533156821        
S/G/Y/R/B/O NT_004424AL445685533513573        
S/G/Y/R/B/O NT_004424AL606761534073133        
S/G/Y/R/B/O NT_004424AL139156534139733        
S/G/Y/R/B/O NT_004424AC105754535870173UT665  177.181 AC105754