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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004525
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004525AC0218832181199171UT5978  1242.341AL592045, AC021883, AL592045
S/G/Y/R/B/O NT_004525AC0274982152034251        
S/G/Y/R/B/O NT_004525AL4510472152088511        
S/G/Y/R/B/O NT_004525AC0990652152268461        
S/G/Y/R/B/O NT_004525AC0965422154697281        
S/G/Y/R/B/O NT_004525AL3654382155863481        
S/G/Y/R/B/O NT_004525AC0731862155902733        
S/G/Y/R/B/O NT_004525AC0731352158576643AFMA114YD13233.003227.571 AC073135
S/G/Y/R/B/O NT_004525AL3901222158888421        
S/G/Y/R/B/O NT_004525AC0928092161680993AFMB317WF1  1242.341 AC092809
S/G/Y/R/B/O NT_004525AC0928092161680993AFMB317WF11246.20  1 AC092809
S/G/Y/R/B/O NT_004525AC0997902162647471        
S/G/Y/R/B/O NT_004525AC0262352163993501        
S/G/Y/R/B/O NT_004525AC0965372164080551        
S/G/Y/R/B/O NT_004525AL5963302165637673        
S/G/Y/R/B/O NT_004525AL3918112166434243        
S/G/Y/R/B/O NT_004525AC0935602167918491        
S/G/Y/R/B/O NT_004525AC0229222168281341        
S/G/Y/R/B/O NT_004525AC0342982168512581        
S/G/Y/R/B/O NT_004525AL5905472169386853        
S/G/Y/R/B/O NT_004525AL6457692169765003        
S/G/Y/R/B/O NT_004525AL3579122170022193        
S/G/Y/R/B/O NT_004525AL1627382171302762        
S/G/Y/R/B/O NT_004525AL5961342172500043        
S/G/Y/R/B/O NT_004525AC0928112172539263        
S/G/Y/R/B/O NT_004525AL3562162175028163AFM225XE11  1242.341AC025060, AC025060, AL356216, AL591380
S/G/Y/R/B/O NT_004525AL3562162175028163AFM225XE111246.20  1AC025060, AC025060, AL356216, AL591380
S/G/Y/R/B/O NT_004525AC0250602175141011        
S/G/Y/R/B/O NT_004525AC0217782175296111        
S/G/Y/R/B/O NT_004525AC0990662175884043        
S/G/Y/R/B/O NT_004525AL5918952177379523        
S/G/Y/R/B/O NT_004525AL1173482177704593        
S/G/Y/R/B/O NT_004525AL1332882179429893AFM290WD1  1242.341AL512343, AL133288, AL512343
S/G/Y/R/B/O NT_004525AL1332882179429893AFM290WD11246.20  1AL512343, AL133288, AL512343
S/G/Y/R/B/O NT_004525AL5123432179477721        
S/G/Y/R/B/O NT_004525AL5920452180266841        
S/G/Y/R/B/O NT_004525AC0448252181441501        
S/G/Y/R/B/O NT_004525AL3597422182252782GATA23F09  1242.341 AL359742, AL671974
S/G/Y/R/B/O NT_004525AL3597042182836123        
S/G/Y/R/B/O NT_004525AL3571222184551133        
S/G/Y/R/B/O NT_004525AL3654442185087703        
S/G/Y/R/B/O NT_004525AL3597322186879141        
S/G/Y/R/B/O NT_004525AC0732522186921841        
S/G/Y/R/B/O NT_004525AC0217622186933831        
S/G/Y/R/B/O NT_004525AL3916282187840563        
S/G/Y/R/B/O NT_004525AL3536892188469623        
S/G/Y/R/B/O NT_004525AL6273082190643642        
S/G/Y/R/B/O NT_004525AL6064622192949673UT860  1242.341 AL512842
S/G/Y/R/B/O NT_004525AL4510542192969631