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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004858
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004858AL6914421469284571        
S/G/Y/R/B/O NT_004858AC0218901469598221        
S/G/Y/R/B/O NT_004858AC0276451469772731        
S/G/Y/R/B/O NT_004858AL4510851469851573        
S/G/Y/R/B/O NT_004858AL3902041471673233        
S/G/Y/R/B/O NT_004858AF3367971472548893        
S/G/Y/R/B/O NT_004858AL6065001473313452        
S/G/Y/R/B/O NT_004858AL5920781474521023        
S/G/Y/R/B/O NT_004858AL1625911475148613        
S/G/Y/R/B/O NT_004858AL3549801477277103AFM220XF81164.101159.321 AL354980
S/G/Y/R/B/O NT_004858AL5904311477654523        
S/G/Y/R/B/O NT_004858AL5135461478829123        
S/G/Y/R/B/O NT_004858AL3584721479653833AFM361TB91163.501159.321 AL358472
S/G/Y/R/B/O NT_004858AL5921521481161423        
S/G/Y/R/B/O NT_004858AL7139991481665471AFMA351WD11165.701161.052AL607067, AL691442, AL607067, AL691442, AL713999
S/G/Y/R/B/O NT_004858AL6070671481692612AFMA351WD11165.701161.052AL691442, AL713999, AL607067, AL691442, AL713999
S/G/Y/R/B/O NT_004858AL6070671483216752UT666  1161.051AL713999, AL353760, AL607067, AL713999
S/G/Y/R/B/O NT_004858AL1394101483280063        
S/G/Y/R/B/O NT_004858AL3538071485133343AFMB337ZH11165.701161.051 AL353807
S/G/Y/R/B/O NT_004858AC0448191486713571        
S/G/Y/R/B/O NT_004858AL1627341486963373AFM081ZC51165.701161.051AC044819, AC044819, AL162734
S/G/Y/R/B/O NT_004858AL1627341487472033GATA25B02  1161.051AC044819, AC044819, AL162734
S/G/Y/R/B/O NT_004858AL1391281487941193        
S/G/Y/R/B/O NT_004858AL3553881489369351        
S/G/Y/R/B/O NT_004858AL3567341491302783        
S/G/Y/R/B/O NT_004858AL1359271492041513AFMB009ZB91165.701161.051 AC007227, AL135927
S/G/Y/R/B/O NT_004858AL5896851492969753        
S/G/Y/R/B/O NT_004858AL1391301494027941        
S/G/Y/R/B/O NT_004858AL1394121494600703        
S/G/Y/R/B/O NT_004858AL3651811495114903        
S/G/Y/R/B/O NT_004858AL5906661496821252AFMA123WG51167.301162.571 AL590666
S/G/Y/R/B/O NT_004858AL1581691498755283UT2150  1161.051 AC025711, AL158169
S/G/Y/R/B/O NT_004858AL1581691498962293AFMA127WH91167.401163.341 AB019485
S/G/Y/R/B/O NT_004858AL3561041499304013        
S/G/Y/R/B/O NT_004858AL1577131500250943        
S/G/Y/R/B/O NT_004858AL3571431501903863        
S/G/Y/R/B/O NT_004858AL1389001503607043ATA20D07  1163.341 AL138900
S/G/Y/R/B/O NT_004858AL1389001503702453UT905  1162.571 AL138900
S/G/Y/R/B/O NT_004858 - AFMA357ZE51164.101159.320  
S/G/Y/R/B/O NT_004858 - GATA13C08  1159.781AL138795, AL138795
S/G/Y/R/B/O NT_004858 - UT455  1161.051AC018785, AL591493, AC018785, AL591493