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Chromosome 1 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004734
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004734AC0685982385735101        
S/G/Y/R/B/O NT_004734AC0920162386067671        
S/G/Y/R/B/O NT_004734AC0256902386765611        
S/G/Y/R/B/O NT_004734AC1059112386906982        
S/G/Y/R/B/O NT_004734AL3653662387457873        
S/G/Y/R/B/O NT_004734AL5916862390216243ATA7G08  1271.481 AC012079, AC024501, AL390999, AL513486, AL591686
S/G/Y/R/B/O NT_004734AL5838452390981953        
S/G/Y/R/B/O NT_004734AL3602712391503493        
S/G/Y/R/B/O NT_004734AC0133712392451381        
S/G/Y/R/B/O NT_004734AL4457042392487481        
S/G/Y/R/B/O NT_004734AC0270682392991091        
S/G/Y/R/B/O NT_004734AC0997852394067441        
S/G/Y/R/B/O NT_004734AC0685652394717981        
S/G/Y/R/B/O NT_004734AL3548752395640031AFM337ZF51277.301273.461AC068565, AC099785, AC068565, AC099785, AL354875
S/G/Y/R/B/O NT_004734AL4456752396898353AFM183XD81278.801274.531AL354875, AL354875, AL445675, AL590679
S/G/Y/R/B/O NT_004734AL4456752397345353UT1917  1273.461 AL445675, AL590679
S/G/Y/R/B/O NT_004734AL6038252398150133        
S/G/Y/R/B/O NT_004734AL6065342398505553        
S/G/Y/R/B/O NT_004734AC0927822400320973        
S/G/Y/R/B/O NT_004734AC0928062401280603        
S/G/Y/R/B/O NT_004734AC0965392403899711AFMC013WC91278.801274.531 AC096539
S/G/Y/R/B/O NT_004734AC0238432404021261        
S/G/Y/R/B/O NT_004734AL5917212404028733        
S/G/Y/R/B/O NT_004734AL6628892404859873        
S/G/Y/R/B/O NT_004734AL5921512406110232        
S/G/Y/R/B/O NT_004734AL5918852407647103GATA50F11  1274.531 AC067778, AC080120, AL591885
S/G/Y/R/B/O NT_004734AL5918852408645683MFD52  1275.681AC025342, AC026041, AC025342, AC026041
S/G/Y/R/B/O NT_004734AC0260412408830301        
S/G/Y/R/B/O NT_004734AL5904832409097491        
S/G/Y/R/B/O NT_004734AC0253422409102141        
S/G/Y/R/B/O NT_004734AL3581772410296213AFMA290YF11278.801274.531AL662915, AL358177, AL662915
S/G/Y/R/B/O NT_004734AL6629152410995402        
S/G/Y/R/B/O NT_004734AL3554752411513213        
S/G/Y/R/B/O NT_004734AL6454652412360283        
S/G/Y/R/B/O NT_004734AL5915942413141702        
S/G/Y/R/B/O NT_004734AC0997572414260273        
S/G/Y/R/B/O NT_004734AL4510072415808923        
S/G/Y/R/B/O NT_004734AL5897632417016733        
S/G/Y/R/B/O NT_004734AL3565122418125341        
S/G/Y/R/B/O NT_004734AL6064832419384613        
S/G/Y/R/B/O NT_004734 - ATA5E03  1274.531AC011293, AC011293, AL590679