Home    Genome Browser    BLAT Search    Help
  Chromosome 9 - RH Maps - Single Contig
 

Chromosome 9 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_017539
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017539AL1588261244645293RH629349409.97  9490.901 AC002099, AC002107, AF186772, AL158826
S/G/Y/R/B/O NT_017539AL1588261244648373RH485549410.69    1 AC002099, AC002107, AF186772, AL158826
S/G/Y/R/B/O NT_017539AL1588261244744373RH911379410.69    1AL593848, AC002099, AC002107, AJ224639, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261244744683RH369629410.65    1AL593848, AC002099, AC002107, AJ224639, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261244776423RH668089412.70    1AL593848, AC002099, AC002107, AJ224639, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261244827253RH627019412.70  9495.601AL593848, AC002099, AC002107, AL158826, AL593848, X52138, X61923
S/G/Y/R/B/O NT_017539AL1588261244950213RH8597  94727.00  1AL593848, AC002099, AC004530, AL158826, AL593848, Y17214
S/G/Y/R/B/O NT_017539AL1588261244950663RH360309412.80    1AL593848, AC002099, AC004530, AL158826, AL593848, Y17214
S/G/Y/R/B/O NT_017539AL1588261244950683RH107649412.70    1AL593848, AC002099, AC004530, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261244951823RH100629410.89    1AL593848, AC002099, AC004530, AL158826, AL593848, Y17214
S/G/Y/R/B/O NT_017539AL1588261244958923RH628659412.70  9495.601AL593848, AC002099, AC004530, AL158826, AL593848, Y17214
S/G/Y/R/B/O NT_017539AL1588261244964253RH629559410.89  9494.101AL593848, AC002099, AC004530, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261244967793RH781129412.70    1AL593848, AC002099, AC004530, AL158826, AL593848, Y17214
S/G/Y/R/B/O NT_017539AL1588261245210773RH269929412.70    1AL593848, AC002099, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261245226113RH132619412.70    1AL593848, AL593848
S/G/Y/R/B/O NT_017539AL1588261245226113RH1153  94734.00  1AL593848, AL593848
S/G/Y/R/B/O NT_017539AL1588261245275233WI-21963    9495.601AC002355, AL593848, AC002099, AC002355, AL158826, AL593848
S/G/Y/R/B/O NT_017539AL1588261245275233RH631059412.80    1AC002355, AL593848, AC002099, AC002355, AL158826, AL593848
S/G/Y/R/B/O NT_017539AC0023251245983013RH761129412.70    1AC001644, AC002355, AL593848, AC001644, AC002325, AC002355, AL593848
S/G/Y/R/B/O NT_017539AC0016441246097003          
S/G/Y/R/B/O NT_017539AL5938481246294192          
S/G/Y/R/B/O NT_017539AC0023551246359072          
S/G/Y/R/B/O NT_017539 - RH100769412.70    0AL445931, AC002105, AC002323, AL445931, Z81330
S/G/Y/R/B/O NT_017539 - RH116169412.70    0  
S/G/Y/R/B/O NT_017539 - RH404539412.70    0AL593848, AC002099, AC002107, AL593848, X52138
S/G/Y/R/B/O NT_017539 - RH988799412.70    0