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  Chromosome 9 - RH Maps - Single Contig
 

Chromosome 9 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_033216
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033216AL158827887948912RH404019310.90    1 AL158827
S/G/Y/R/B/O NT_033216AL158827887954532RH992199310.90    1 AL158827
S/G/Y/R/B/O NT_033216AL158827888384182RH284429309.06    1 AL158827
S/G/Y/R/B/O NT_033216AL158827888384552RH8263  93215.00  1 AL158827
S/G/Y/R/B/O NT_033216AL158827888467862RH920729309.06    1 AL158827
S/G/Y/R/B/O NT_033216AL158827888603922RH631009309.06  9352.001 AL158827
S/G/Y/R/B/O NT_033216AL158827888666812RH14371  93215.00  1 AL158827
S/G/Y/R/B/O NT_033216AL158827888666812RH627619309.06  9350.901 AL158827
S/G/Y/R/B/O NT_033216AL158827888688672RH175489310.90    1 AL158827
S/G/Y/R/B/O NT_033216AL158827888695472RH629919309.06  9352.001 AL158827
S/G/Y/R/B/O NT_033216AL158827888713092RH404499309.06    1 AL158827
S/G/Y/R/B/O NT_033216AL158827888849632RH164269313.03    2 AL158827, AL160055
S/G/Y/R/B/O NT_033216AL158827889053492RH403959313.03    2AL691447, AC009485, AL158827, AL160055, AL691447
S/G/Y/R/B/O NT_033216AL158827889207292RH628749307.02  9349.402AL691447, AC009485, AL158827, AL160055, AL691447
S/G/Y/R/B/O NT_033216AL158827889207292RH14795  93148.00  2AL691447, AC009485, AL158827, AL160055, AL691447
S/G/Y/R/B/O NT_033216AL158827889260232RH756909308.54    1 AC009485, AL158827
S/G/Y/R/B/O NT_033216AL158827889454182RH485769308.44    2AL358232, AL691447, AC009485, AL158827, AL160055, AL358232, AL691447
S/G/Y/R/B/O NT_033216AL158827889454692RH485139308.44    2AL358232, AL691447, AL158827, AL160055, AL358232, AL691447
S/G/Y/R/B/O NT_033216AL445670890103953RH983499309.06    1 AB019534, AC009485, AL445670
S/G/Y/R/B/O NT_033216AL590705891300653          
S/G/Y/R/B/O NT_033216AL512590893687282RH1033909312.72    1 AL512590
S/G/Y/R/B/O NT_033216AL449464894733763RH627879312.72  9354.201AL162385, AL162385, AL449464
S/G/Y/R/B/O NT_033216AL162385895745063RH628389312.72  9354.201 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385895772653RH627219312.72  9354.201 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385895784183RH785189312.72    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385895786003RH403719312.72    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385895872083RH931559315.99    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385896320553RH711509312.72    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385896355193RH755029314.98    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL162385896465023RH38526  93229.00  1 AL162385
S/G/Y/R/B/O NT_033216AL162385896465343RH757049313.34    1 AL162385, AL442130
S/G/Y/R/B/O NT_033216AL445531896487663RH9087  93234.00  1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896509033RH1024969312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896511053RH683769312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896517063RH782659312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896517403RH106639313.03    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896524763RH627739312.72  9354.201 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896525483RH403229312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896580713RH658759312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL445531896707023RH464029312.72    1 AL442130, AL445531
S/G/Y/R/B/O NT_033216AL499604898479873RH270379314.67    1 AC051640, AL499604
S/G/Y/R/B/O NT_033216AL499604898793073RH403819314.77    1 AL499604
S/G/Y/R/B/O NT_033216AL499604898821163RH626749314.77  9356.201 AL499604
S/G/Y/R/B/O NT_033216AL499604899066923RH629499316.63  9358.201 AL499604
S/G/Y/R/B/O NT_033216AL499604899067363RH162119314.67    1 AL499604
S/G/Y/R/B/O NT_033216AL499604899076093RH630609314.6793238.009356.301 AL499604
S/G/Y/R/B/O NT_033216AL354726899930983RH707709314.98    1 AL354726
S/G/Y/R/B/O NT_033216AL354726899944093RH1024519314.67    1 AL354726
S/G/Y/R/B/O NT_033216AL137073900549613RH270419314.77    1 AL137073
S/G/Y/R/B/O NT_033216AL137073900604103RH404039316.68    1 AL137073


  NT_033216 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033216AL137073900620803RH714439316.63    1 AL137073
S/G/Y/R/B/O NT_033216AL137073900771253WI-7447    9358.501 AL137073
S/G/Y/R/B/O NT_033216AL137073900987413RH104539316.68    1 AL137073
S/G/Y/R/B/O NT_033216AL137073900990523RH631629316.6393256.009358.401 AL137073
S/G/Y/R/B/O NT_033216AL137073900991123RH285779317.80    1 AL137073
S/G/Y/R/B/O NT_033216AL137073900991783RH664089316.63    1 AL137073
S/G/Y/R/B/O NT_033216AL360081901996963          
S/G/Y/R/B/O NT_033216AL591502902656623RH14799  93280.009360.301 AL591502
S/G/Y/R/B/O NT_033216AL591502902668773RH183289318.01    1 AL591502
S/G/Y/R/B/O NT_033216AL591502902800833RH628849318.0793275.009360.301 AL591502
S/G/Y/R/B/O NT_033216AL591502902800833RH178689318.01    1 AL591502
S/G/Y/R/B/O NT_033216AL591502902801473RH185499319.07    1 AL591502
S/G/Y/R/B/O NT_033216AL356282903910453RH684389318.12    1 AL356282
S/G/Y/R/B/O NT_033216AL445495904199833          
S/G/Y/R/B/O NT_033216AL353782907135173RH159629317.48    1 AL353782
S/G/Y/R/B/O NT_033216 - RH104649315.93    1AL391219, AL391219
S/G/Y/R/B/O NT_033216 - RH404359314.67    0  
S/G/Y/R/B/O NT_033216 - RH683989316.42    1AL137848, AL157827, AC025394, AL137848, AL157827
S/G/Y/R/B/O NT_033216 - RH755019316.04    1AL157827, AC025394, AL157827
S/G/Y/R/B/O NT_033216 - RH930259314.67    0AL499604, AL499604