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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_006081 | Z54334 | 2479146 | 3 | chr4 | NT_006081 | Z69922 | 2511075 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z69922 | 2511075 | 3 | chr4 | NT_006081 | Z68277 | 2534993 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_006081 | Z68277 | 2534993 | 3 | chr4 | NT_006081 | AL110117 | 2566613 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z68277 | 2534993 | 3 |   |   | AC084195 | 2534993 | | 15764 | 0 | 0 | 15764 |
S/G/Y/R/B/O |
NT_006081 | AL110117 | 2566613 | 3 | chr4 | NT_006081 | Z68870 | 2568398 | 3 | 0 | 0 | 104 | 104 |
S/G/Y/R/B/O |
NT_006081 | Z68870 | 2568398 | 3 | chr4 | NT_006081 | Z68757 | 2603767 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_006081 | Z68870 | 2568398 | 3 |   |   | AC055890 | 2568398 | | 15590 | 0 | 12022 | 27612 |
S/G/Y/R/B/O |
NT_006081 | Z68870 | 2568398 | 3 |   |   | AC084195 | 2568398 | | 13429 | 1633 | 3270 | 18332 |
S/G/Y/R/B/O |
NT_006081 | Z68757 | 2603767 | 3 | chr4 | NT_006081 | AP000780 | 2610040 | 1 | 5576 | 0 | 0 | 5576 |
S/G/Y/R/B/O |
NT_006081 | AP000780 | 2610040 | 1 | chr4 | NT_006081 | Z68494 | 2655658 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | AP000780 | 2610040 | 1 | chr4 | NT_006081 | Z54072 | 2681965 | 3 | 14990 | 2735 | 1874 | 19599 |
S/G/Y/R/B/O |
NT_006081 | AP000780 | 2610040 | 1 |   |   | AC055890 | 2568398 | | 33914 | 11858 | 35964 | 81736 |
S/G/Y/R/B/O |
NT_006081 | AP000780 | 2610040 | 1 |   |   | AC084195 | 2568398 | | 18985 | 6292 | 45433 | 70710 |
S/G/Y/R/B/O |
NT_006081 | AP000780 | 2610040 | 1 |   |   | AL158133 | 2744933 | | 11291 | 2733 | 2032 | 16056 |
S/G/Y/R/B/O |
NT_006081 | Z68494 | 2655658 | 3 | chr4 | NT_006081 | Z68162 | 2656350 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z68162 | 2656350 | 3 | chr4 | NT_006081 | Z54072 | 2681965 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z68162 | 2656350 | 3 |   |   | AC055890 | 2763269 | | 19580 | 1524 | 1660 | 22764 |
S/G/Y/R/B/O |
NT_006081 | Z54072 | 2681965 | 3 | chr4 | NT_006081 | Z68279 | 2722063 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_006081 | Z54072 | 2681965 | 3 | chr4 | NT_006081 | AP000780 | 2610040 | 1 | 14990 | 2735 | 1874 | 19599 |
S/G/Y/R/B/O |
NT_006081 | Z54072 | 2681965 | 3 |   |   | AC055890 | 2610040 | | 18031 | 9105 | 1285 | 28421 |
S/G/Y/R/B/O |
NT_006081 | Z54072 | 2681965 | 3 |   |   | AL158133 | 2610040 | | 25186 | 0 | 0 | 25186 |
S/G/Y/R/B/O |
NT_006081 | Z68279 | 2722063 | 3 | chr4 | NT_006081 | AL158132 | 2744933 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z68279 | 2722063 | 3 |   |   | AC055890 | 2722063 | | 13239 | 4202 | 4090 | 21531 |
S/G/Y/R/B/O |
NT_006081 | AL158132 | 2744933 | 3 | chr4 | NT_006081 | Z74617 | 2763269 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | AL158132 | 2744933 | 3 |   |   | AC084195 | 2681965 | | 11300 | 0 | 541 | 11841 |
S/G/Y/R/B/O |
NT_006081 | Z74617 | 2763269 | 3 | chr4 | NT_006081 | AL158131 | 2799548 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z74617 | 2763269 | 3 |   |   | AC055890 | 2610040 | | 18184 | 0 | 0 | 18184 |
S/G/Y/R/B/O |
NT_006081 | Z74617 | 2763269 | 3 |   |   | AC084195 | 2610040 | | 19087 | 0 | 0 | 19087 |
S/G/Y/R/B/O |
NT_006081 | Z74617 | 2763269 | 3 |   |   | AP001878 | 2610040 | | 22756 | 0 | 0 | 22756 |
S/G/Y/R/B/O |
NT_006081 | AL158131 | 2799548 | 3 | chr4 | NT_006081 | Z68280 | 2799688 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_006081 | Z68280 | 2799688 | 3 | chr4 | NT_006081 | AL390065 | 2843167 | 2 | 21003 | 0 | 0 | 21003 |
S/G/Y/R/B/O |
NT_006081 | Z68280 | 2799688 | 3 |   |   | AP001878 | 2843167 | | 23669 | 0 | 0 | 23669 |
S/G/Y/R/B/O |
NT_006081 | AL390065 | 2843167 | 2 | chr4 | NT_006081 | AC005516 | 2977190 | 3 | 17757 | 0 | 0 | 17757 |
S/G/Y/R/B/O |
NT_006081 | AL390065 | 2843167 | 2 |   |   | AC091441 | 2977190 | | 56789 | 8470 | 28125 | 93384 |
S/G/Y/R/B/O |
NT_006081 | AC005516 | 2977190 | 3 | chr4 | NT_006081 | AL645949 | 3177534 | 3 | 0 | 0 | 1695 | 1695 |
S/G/Y/R/B/O |
NT_006081 | AC005516 | 2977190 | 3 |   |   | AC091441 | 2799688 | | 11665 | 0 | 9595 | 21260 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 | chr4 | NT_006081 | AL590235 | 3320685 | 1 | 0 | 0 | 21928 | 21928 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 | chr4 | NT_006081 | AL121796 | 3480345 | 1 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 | chr4 | NT_006081 | AL121796 | 3480345 | 1 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 | chr4 | NT_006081 | AL121796 | 3480345 | 1 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 | chr4 | NT_006081 | AL121796 | 3480345 | 1 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AC074370 | 2977190 | | 19194 | 0 | 0 | 19194 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AC074370 | 2977190 | | 19194 | 0 | 0 | 19194 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AL096838 | 2977190 | | 62038 | 0 | 0 | 62038 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AL096838 | 2977190 | | 62038 | 0 | 0 | 62038 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AL117391 | 2977190 | | 62038 | 0 | 0 | 62038 |
S/G/Y/R/B/O |
NT_006081 | AL645949 | 3177534 | 3 |   |   | AL117391 | 2977190 | | 62038 | 0 | 0 | 62038 |
S/G/Y/R/B/O |
NT_006081 | AL590235 | 3320685 | 1 | chr4 | NT_006081 | AL121796 | 3480345 | 1 | 12498 | 0 | 4808 | 17306 |
S/G/Y/R/B/O |
NT_006081 | AL590235 | 3320685 | 1 |   |   | AC074370 | 3320685 | | 151867 | 3866 | 20023 | 175756 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 | chr4 | NT_006081 | AL645949 | 3177534 | 3 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 | chr4 | NT_006081 | AL645949 | 3177534 | 3 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 | chr4 | NT_006081 | AL645949 | 3177534 | 3 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 | chr4 | NT_006081 | AL645949 | 3177534 | 3 | 12504 | 0 | 0 | 12504 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 |   |   | AC074370 | 3177534 | | 78703 | 0 | 4840 | 83543 |
S/G/Y/R/B/O |
NT_006081 | AL121796 | 3480345 | 1 |   |   | AC074370 | 3177534 | | 78703 | 0 | 4840 | 83543 |
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