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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_034706 | AC114771 | 141483672 | 1 | chr4 | NT_034706 | AC093671 | 141609292 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC114771 | 141483672 | 1 |   |   | AC011079 | 141316374 | | 28494 | 0 | 0 | 28494 |
S/G/Y/R/B/O |
NT_034706 | AC114771 | 141483672 | 1 |   |   | AC048378 | 141316374 | | 107013 | 0 | 35904 | 142917 |
S/G/Y/R/B/O |
NT_034706 | AC114771 | 141483672 | 1 |   |   | AC109591 | 149696258 | | 81428 | 0 | 0 | 81428 |
S/G/Y/R/B/O |
NT_034706 | AC093671 | 141609292 | 3 | chr4 | NT_034706 | AC108019 | 141795662 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_034706 | AC093671 | 141609292 | 3 |   |   | AC011079 | 141413770 | | 45629 | 0 | 0 | 45629 |
S/G/Y/R/B/O |
NT_034706 | AC093671 | 141609292 | 3 |   |   | AC025490 | 141413770 | | 70146 | 4101 | 0 | 74247 |
S/G/Y/R/B/O |
NT_034706 | AC093671 | 141609292 | 3 |   |   | AC048378 | 141413770 | | 27166 | 1882 | 5950 | 34998 |
S/G/Y/R/B/O |
NT_034706 | AC093671 | 141609292 | 3 |   |   | AC109591 | 141795662 | | 24065 | 0 | 42051 | 66116 |
S/G/Y/R/B/O |
NT_034706 | AC108019 | 141795662 | 3 | chr4 | NT_034706 | AC096733 | 141930529 | 3 | 0 | 986 | 0 | 986 |
S/G/Y/R/B/O |
NT_034706 | AC108019 | 141795662 | 3 |   |   | AC025490 | 141795662 | | 17891 | 0 | 33324 | 51215 |
S/G/Y/R/B/O |
NT_034706 | AC096733 | 141930529 | 3 | chr4 | NT_034706 | AC097475 | 142118573 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC097475 | 142118573 | 3 | chr4 | NT_034706 | AC093905 | 142252732 | 3 | 0 | 0 | 1831 | 1831 |
S/G/Y/R/B/O |
NT_034706 | AC093905 | 142252732 | 3 | chr4 | NT_034706 | AC107220 | 142435594 | 3 | 0 | 1997 | 0 | 1997 |
S/G/Y/R/B/O |
NT_034706 | AC093905 | 142252732 | 3 |   |   | AC011940 | 142252732 | | 28151 | 0 | 1950 | 30101 |
S/G/Y/R/B/O |
NT_034706 | AC107220 | 142435594 | 3 | chr4 | NT_034706 | AC097504 | 142500986 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC107220 | 142435594 | 3 |   |   | AC011940 | 142435594 | | 27877 | 2748 | 13966 | 44591 |
S/G/Y/R/B/O |
NT_034706 | AC097504 | 142500986 | 3 | chr4 | NT_034706 | AC104067 | 142685201 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_034706 | AC104067 | 142685201 | 3 | chr4 | NT_034706 | AC118480 | 142821682 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC118480 | 142821682 | 3 | chr4 | NT_034706 | AC096774 | 142928172 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC096774 | 142928172 | 3 | chr4 | NT_034706 | AC097476 | 143104610 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC096774 | 142928172 | 3 |   |   | AC015744 | 142500986 | | 45839 | 0 | 0 | 45839 |
S/G/Y/R/B/O |
NT_034706 | AC097476 | 143104610 | 3 | chr4 | NT_034706 | AC108077 | 143262462 | 3 | 0 | 1995 | 0 | 1995 |
S/G/Y/R/B/O |
NT_034706 | AC097476 | 143104610 | 3 |   |   | AC015744 | 142500986 | | 41302 | 5299 | 0 | 46601 |
S/G/Y/R/B/O |
NT_034706 | AC108077 | 143262462 | 3 | chr4 | NT_034706 | AC093860 | 143367445 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_034706 | AC108077 | 143262462 | 3 |   |   | AC025879 | 143262462 | | 78510 | 0 | 1089 | 79599 |
S/G/Y/R/B/O |
NT_034706 | AC093860 | 143367445 | 3 | chr4 | NT_034706 | AC108060 | 143556888 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034706 | AC093860 | 143367445 | 3 | chr4 | NT_034706 | AC023350 | 143695290 | 1 | 66637 | 0 | 36713 | 103350 |
S/G/Y/R/B/O |
NT_034706 | AC093860 | 143367445 | 3 |   |   | AC025879 | 143695290 | | 60600 | 0 | 7586 | 68186 |
S/G/Y/R/B/O |
NT_034706 | AC108060 | 143556888 | 3 | chr4 | NT_034706 | AC023350 | 143695290 | 1 | 27027 | 0 | 2416 | 29443 |
S/G/Y/R/B/O |
NT_034706 | AC108060 | 143556888 | 3 |   |   | AC024364 | 143695290 | | 83461 | 1668 | 0 | 85129 |
S/G/Y/R/B/O |
NT_034706 | AC023350 | 143695290 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_034706 | AC023350 | 143695290 | 1 | chr4 | NT_034706 | AC093860 | 143367445 | 3 | 66637 | 0 | 36713 | 103350 |
S/G/Y/R/B/O |
NT_034706 | AC023350 | 143695290 | 1 |   |   | AC024364 | 143695290 | | 25951 | 1010 | 10187 | 37148 |
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