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  Chromosome 5 - YAC Map - Single Contig
 

Chromosome 5 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006693
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006693AC027153516253831      
S/G/Y/R/B/O NT_006693AC106817516308251      
S/G/Y/R/B/O NT_006693AC091935516654332      
S/G/Y/R/B/O NT_006693AC109998517622473      
S/G/Y/R/B/O NT_006693AC091903518880413D5S20355161.001AC109998, AC091903, AC109998
S/G/Y/R/B/O NT_006693AC091920519807301      
S/G/Y/R/B/O NT_006693AC008827521172783      
S/G/Y/R/B/O NT_006693AC022433521893793AFM248YF55160.001 AC022433
S/G/Y/R/B/O NT_006693AC008936523251533      
S/G/Y/R/B/O NT_006693AC091860523816681      
S/G/Y/R/B/O NT_006693AC010478524400023WI-20365158.001AC091860, AC010478, AC091860
S/G/Y/R/B/O NT_006693AC010478524476343WI-73885159.001AC091860, AC010478, AC091860
S/G/Y/R/B/O NT_006693AC026798526267203D5S8225157.001 AC026798
S/G/Y/R/B/O NT_006693AC091834526285093      
S/G/Y/R/B/O NT_006693AC091866526819673      
S/G/Y/R/B/O NT_006693AC091831528019701      
S/G/Y/R/B/O NT_006693AC008808528268863D5S4665156.001AC022430, AC008808, AC022430
S/G/Y/R/B/O NT_006693AC008831528448703      
S/G/Y/R/B/O NT_006693AC008919529675603      
S/G/Y/R/B/O NT_006693AC112187530742491      
S/G/Y/R/B/O NT_006693AC022430531806431      
S/G/Y/R/B/O NT_006693AC016631531937462      
S/G/Y/R/B/O NT_006693AC008944532459783CHLC.GATA81C065155.001AC112187, AC008944, AC112187
S/G/Y/R/B/O NT_006693AC116357533804411      
S/G/Y/R/B/O NT_006693AC091827535063203      
S/G/Y/R/B/O NT_006693AC022126536828843AFM150XG115162.001 AC022126
S/G/Y/R/B/O NT_006693AC008900538671183D5S20925163.001AC026230, AC008900, AC018652, AC026230, AC108115
S/G/Y/R/B/O NT_006693AC026230539097983      
S/G/Y/R/B/O NT_006693AC008910539721223      
S/G/Y/R/B/O NT_006693AC027326539796993      
S/G/Y/R/B/O NT_006693AC022133539898853      
S/G/Y/R/B/O NT_006693AC025180540394743      
S/G/Y/R/B/O NT_006693AC008966541171863D5S6235164.001 AC008455, AC008973, AC016619
S/G/Y/R/B/O NT_006693AC008966542181623WI-90245165.001 AC008966, AC016619, AF113511
S/G/Y/R/B/O NT_006693AC016641542705292      
S/G/Y/R/B/O NT_006693AC026477542995971      
S/G/Y/R/B/O NT_006693AC008866543270572      
S/G/Y/R/B/O NT_006693AC026752543550561      
S/G/Y/R/B/O NT_006693AC027329543797903      
S/G/Y/R/B/O NT_006693AC108114544540502D5S20375167.001 AC108114
S/G/Y/R/B/O NT_006693AC108114544637442WI-30715166.001AC008866, AC027329, AC008866, AC027329, AC108114
S/G/Y/R/B/O NT_006693AC008901547144423WI-43465168.001AC024569, AC008901, AC024569
S/G/Y/R/B/O NT_006693AC024569547213983      
S/G/Y/R/B/O NT_006693AC025175548886323      
S/G/Y/R/B/O NT_006693AC024571550495983      
S/G/Y/R/B/O NT_006693AC016601551408853CHLC.GATA69B035170.001AC008882, AC008792, AC008882, AC016601
S/G/Y/R/B/O NT_006693AC008882552294363D5S6285171.001AC034246, AC008777, AC008882, AC016580, AC026006, AC034246
S/G/Y/R/B/O NT_006693AC034246552546603AFMA101YE95172.001 AC008777, AC016580, AC026476, AC034246
S/G/Y/R/B/O NT_006693AC008935553311583WI-88275169.001AC016581, AC008935, AC008960, AC016580, AC016581
S/G/Y/R/B/O NT_006693AC008935553841533D5S19685173.001AC008873, AC008873, AC008935, AC016580


  NT_006693 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006693AC008873554163533      
S/G/Y/R/B/O NT_006693AC092366555422633      
S/G/Y/R/B/O NT_006693AC091888556068902      
S/G/Y/R/B/O NT_006693AC010835556345621      
S/G/Y/R/B/O NT_006693AC016581556516151      
S/G/Y/R/B/O NT_006693AC008928557570003WI-41505174.001AC010835, AC016583, AC091888, AC008928, AC010835, AC016583, AC091888
S/G/Y/R/B/O NT_006693AC016583557860773WI-97615175.001 AC016583