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  Chromosome 5 - YAC Map - Single Contig
 

Chromosome 5 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_016755
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016755AC0106111266481181      
S/G/Y/R/B/O NT_016755AC0227121266534841      
S/G/Y/R/B/O NT_016755AC1067571266774561      
S/G/Y/R/B/O NT_016755AC0214631266878211      
S/G/Y/R/B/O NT_016755AC0108021267012531      
S/G/Y/R/B/O NT_016755AC1143111267177671      
S/G/Y/R/B/O NT_016755AC0086931267640723      
S/G/Y/R/B/O NT_016755AC0267201268431133      
S/G/Y/R/B/O NT_016755AC0085801269942032      
S/G/Y/R/B/O NT_016755AC0210761270136633      
S/G/Y/R/B/O NT_016755AC0224491271057313      
S/G/Y/R/B/O NT_016755AC0165561272692523WI-58715424.001 AC008527, AC008613, AC016556, AC024121, AC040974
S/G/Y/R/B/O NT_016755AC0165561272968433AFM274VD95426.001 AC008613, AC016556, AC024121
S/G/Y/R/B/O NT_016755AC0165561273038603D5S20985425.001 AC008527
S/G/Y/R/B/O NT_016755AC0254651273415482      
S/G/Y/R/B/O NT_016755AC0104071273933832      
S/G/Y/R/B/O NT_016755AC1121961274841581      
S/G/Y/R/B/O NT_016755AC1133571274882971      
S/G/Y/R/B/O NT_016755AC0085121275073173      
S/G/Y/R/B/O NT_016755AC0210801275881023CHLC.GATA3F035422.001AC008512, AC008580, AC008512, AC008580, AC021080, AC026409
S/G/Y/R/B/O NT_016755AC0267731276722943WI-51435423.001 AC010222, AC026409, AC026773
S/G/Y/R/B/O NT_016755AC0085411276819953      
S/G/Y/R/B/O NT_016755AC0264221278173943      
S/G/Y/R/B/O NT_016755AC1067921278708503      
S/G/Y/R/B/O NT_016755AC0103691279500773      
S/G/Y/R/B/O NT_016755AC0104931280728103      
S/G/Y/R/B/O NT_016755AC0085481281666702D5S6225421.001AC023974, AC008548, AC023974
S/G/Y/R/B/O NT_016755AC0085481281673492AFMB352XH55420.001 AC008548
S/G/Y/R/B/O NT_016755AC0086061281971562      
S/G/Y/R/B/O NT_016755AC0239741282018611      
S/G/Y/R/B/O NT_016755AC1067861282342203      
S/G/Y/R/B/O NT_016755AC0221161283383993      
S/G/Y/R/B/O NT_016755AC0086691284077213AFMB027ZG95419.001AC022116, AC008669, AC012424, AC022116, AC106812
S/G/Y/R/B/O NT_016755AC0086691284181003WI-57335417.001AC022116, AC022116, AC106812
S/G/Y/R/B/O NT_016755AC0086691285746103D5S19755418.001AC021463, AC008669, AC021463
S/G/Y/R/B/O NT_016755AC0103721286304843CHLC.GATA5G04.3505428.001 AC008624, AC010372, AC094102
S/G/Y/R/B/O NT_016755AC0105871287405183      
S/G/Y/R/B/O NT_016755AC0267231288955243CHLC.GATA46H115429.001AC008433, AC022712, AC008433, AC022712, AC026723, AC093257
S/G/Y/R/B/O NT_016755AC0084331289077503      
S/G/Y/R/B/O NT_016755AC0932451289856003      
S/G/Y/R/B/O NT_016755AC0102351292349783WI-54585430.001AC008546, AC008546, AC010235
S/G/Y/R/B/O NT_016755AC0085461292352323      
S/G/Y/R/B/O NT_016755AC0935351294260643WI-62725264.001AC023196, AC099513, AC023196, AC093535, AC099513
S/G/Y/R/B/O NT_016755AC0995131294266993      
S/G/Y/R/B/O NT_016755AC0231961295299471      
S/G/Y/R/B/O NT_016755AC0932421295349121      
S/G/Y/R/B/O NT_016755AC0935211295425662      
S/G/Y/R/B/O NT_016755AC0166761295598551      
S/G/Y/R/B/O NT_016755AC1094641295634001      
S/G/Y/R/B/O NT_016755AC0932201296132011      


  NT_016755 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016755AC1094501296812822WI-49175427.001AC016676, AC093220, AC109464, AC016676, AC093220, AC109450, AC109464
S/G/Y/R/B/O NT_016755AC1133981297152252      
S/G/Y/R/B/O NT_016755AC0102551301152263WI-77525414.001 AC010255, AC090062, AF270645, U22384
S/G/Y/R/B/O NT_016755AC0102551301216353D5S4675415.001 AC010255, AC090062, AF270645
S/G/Y/R/B/O NT_016755AC0102551302407703WI-60795416.001AC008436, AC113349, AC008436, AC010255, AC113349
S/G/Y/R/B/O NT_016755AC0084361302466933      
S/G/Y/R/B/O NT_016755AC1133491303534961      
S/G/Y/R/B/O NT_016755AC0994981303794302      
S/G/Y/R/B/O NT_016755AC0221011305250593      
S/G/Y/R/B/O NT_016755AC1100031306163221      
S/G/Y/R/B/O NT_016755AC0932061308029943      
S/G/Y/R/B/O NT_016755AC0084441309425143WI-18895407.001AC044796, AC093206, AC093242, AC008444, AC044796, AC093206, AC093242
S/G/Y/R/B/O NT_016755AC0104621309759733      
S/G/Y/R/B/O NT_016755AC0086291311913073AFM331XD55408.001AC017044, AC008629, AC017044
S/G/Y/R/B/O NT_016755AC0170441312207391      
S/G/Y/R/B/O NT_016755AC1094581312221012      
S/G/Y/R/B/O NT_016755AC0447961312795772      
S/G/Y/R/B/O NT_016755AC1100091313386912      
S/G/Y/R/B/O NT_016755AC1143181313943062      
S/G/Y/R/B/O NT_016755AC0133901315363901      
S/G/Y/R/B/O NT_016755AC0162821315646541      
S/G/Y/R/B/O NT_016755AC1094711316393273      
S/G/Y/R/B/O NT_016755AC1094431316962363      
S/G/Y/R/B/O NT_016755AC0210821318192733      
S/G/Y/R/B/O NT_016755AC0246221318773931      
S/G/Y/R/B/O NT_016755AC1163621318848961      
S/G/Y/R/B/O NT_016755AC0246301318889661