Chromosome 5 - YAC Map - Single Contig
Chromosome 5 - YAC Map - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Map Page
Whole Chromosome
Single Contigs
Line color code:
White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086
NT_023089
NT_006576
NT_033103
NT_029977
NT_016779
NT_033104
NT_023110
NT_033119
NT_023097
NT_023084
NT_023115
NT_023315
NT_033112
NT_006547
NT_023162
NT_006577
NT_023114
NT_023216
NT_023124
NT_026281
NT_023085
NT_033113
NT_033110
NT_006679
NT_023195
NT_033085
NT_006702
NT_023098
NT_028188
NT_031794
NT_023102
NT_023081
NT_006693
NT_016864
NT_033115
NT_033092
NT_006665
NT_006497
NT_006431
NT_033093
NT_006790
NT_006713
NT_026283
NT_023083
NT_033077
NT_033111
NT_033079
NT_007022
NT_006540
NT_030680
NT_029973
NT_028179
NT_033118
NT_006731
NT_023148
NT_023290
NT_033094
NT_033116
NT_006654
NT_033095
NT_033098
NT_033082
NT_033096
NT_023091
NT_006789
NT_033108
NT_006899
NT_006780
NT_030685
NT_025721
NT_033106
NT_025702
NT_023192
NT_029295
NT_033097
NT_016755
NT_029975
NT_033083
NT_033084
NT_023238
NT_033105
NT_007072
NT_033091
NT_016714
NT_006859
NT_006489
NT_029289
NT_033078
NT_023269
NT_023248
NT_030691
NT_006788
NT_030698
NT_033117
NT_033080
NT_023133
NT_006907
NT_023132
NT_033089
NT_006725
NT_023093
NT_006802
NT_006932
NT_006519
NT_030685
Links
Contig
Accession
Chr Start
Phs
STS Marker
YAC Chr
WI YAC
Plc
Other Accessions in Assembly
All Accessions
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC020675
121277858
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC069118
121294715
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC114295
121353460
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC093534
121456435
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC010267
121588117
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC091986
121705453
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC025088
121866213
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC008651
121880045
3
WI-9486
12
251.00
2
AC015550
,
AC090061
,
AC008651, AC015550, AC090061
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC008651
121944025
3
CHLC.GATA50C10
5
400.00
1
 
AC008651
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC027304
121980036
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC008524
122077968
3
WI-10774
5
401.00
1
 
AC108124
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC010296
122105325
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC093295
122330230
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC112180
122607063
3
AFMA113YE9
5
402.00
1
 
AC112180
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC010276
122709124
3
D5S404
5
403.00
1
 
AC010276
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC027341
122849461
3
D5S494
5
404.00
1
AC024383
,
AC024383
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC027341
122850857
3
AFM183XG9
5
405.00
1
AC024383
,
AC024383
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC073538
122851371
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC114322
122921227
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC024383
122953748
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC114945
122994275
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC022093
123130797
3
D5S639
5
406.00
1
 
AC022093
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC113344
123179712
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC114313
123241141
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_030685
AC022310
123241142
2