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  Chromosome 5 - YAC Map - Single Contig
 

Chromosome 5 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_016779
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016779AC016618135496841      
S/G/Y/R/B/O NT_016779AC020979136094063      
S/G/Y/R/B/O NT_016779AC016553136914843      
S/G/Y/R/B/O NT_016779AC109461138034123      
S/G/Y/R/B/O NT_016779AC016657138590853      
S/G/Y/R/B/O NT_016779AC010450140075133WI-2003544.001AC016618, AC010450, AC016592, AC016618
S/G/Y/R/B/O NT_016779AC010450140429413D5S2081543.001 AC006406
S/G/Y/R/B/O NT_016779AC010364140695003      
S/G/Y/R/B/O NT_016779AC016546141872043      
S/G/Y/R/B/O NT_016779AC026811142911973      
S/G/Y/R/B/O NT_016779AC016576144365013      
S/G/Y/R/B/O NT_016779AC034251145607423      
S/G/Y/R/B/O NT_016779AC010419147043693      
S/G/Y/R/B/O NT_016779AC026456147970453      
S/G/Y/R/B/O NT_016779AC020778148459261      
S/G/Y/R/B/O NT_016779AC016549148564582      
S/G/Y/R/B/O NT_016779AC024574149025702      
S/G/Y/R/B/O NT_016779AC010413149043761      
S/G/Y/R/B/O NT_016779AC092133149707761      
S/G/Y/R/B/O NT_016779AC016654149777703      
S/G/Y/R/B/O NT_016779AC016652150049043      
S/G/Y/R/B/O NT_016779AC026749151706113      
S/G/Y/R/B/O NT_016779AC010491153013933      
S/G/Y/R/B/O NT_016779AC025456153223463      
S/G/Y/R/B/O NT_016779AC016575154447143      
S/G/Y/R/B/O NT_016779AC016651156286393      
S/G/Y/R/B/O NT_016779AC016648158162303WI-10859546.001AC020982, AC113406, AC012550, AC016648, AC020982, AC026441, AC113406
S/G/Y/R/B/O NT_016779AC020982158352093      
S/G/Y/R/B/O NT_016779AC113406159514141      
S/G/Y/R/B/O NT_016779AC114964159525321      
S/G/Y/R/B/O NT_016779AC016881159661451      
S/G/Y/R/B/O NT_016779AC010477160389843AFM203ZG5P545.001AC114964, AC022157, AC114964
S/G/Y/R/B/O NT_016779AC010638161992213D5S1989547.001 AC010638
S/G/Y/R/B/O NT_016779AC091970161997033      
S/G/Y/R/B/O NT_016779AC027332163914423D5S1954548.001 AC027332
S/G/Y/R/B/O NT_016779AC091872165205593CHLC.GATA21B12549.001AC018762, AC026807, AC018762, AC026807, AC091872
S/G/Y/R/B/O NT_016779AC018762165226473      
S/G/Y/R/B/O NT_016779AC026807165867433      
S/G/Y/R/B/O NT_016779AC016650166774553AFM242YB2552.001 AC016650
S/G/Y/R/B/O NT_016779AC092335167894443      
S/G/Y/R/B/O NT_016779AC022102168781502      
S/G/Y/R/B/O NT_016779AC020980168831831      
S/G/Y/R/B/O NT_016779AC013658168907101      
S/G/Y/R/B/O NT_016779AC018409169780271      
S/G/Y/R/B/O NT_016779AC016621170047411      
S/G/Y/R/B/O NT_016779AC022113170325401      
S/G/Y/R/B/O NT_016779AC024588172259153D5S1963550.001 AC024588
S/G/Y/R/B/O NT_016779AC024588173147633D5S416551.001AC010310, AC010358, AC010473, AC010310, AC010358, AC010473, AC024588
S/G/Y/R/B/O NT_016779AC010473173171933      
S/G/Y/R/B/O NT_016779AC010358173537883      


  NT_016779 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016779AC010310174074713      
S/G/Y/R/B/O NT_016779AC010607175771293D5S1997553.001 AC010607
S/G/Y/R/B/O NT_016779AC108111175843782      
S/G/Y/R/B/O NT_016779AC026790177663453D5S486554.001AC091878, AC026790, AC091878
S/G/Y/R/B/O NT_016779AC091878177889353      
S/G/Y/R/B/O NT_016779AC026785178391833      
S/G/Y/R/B/O NT_016779AC026504179753771      
S/G/Y/R/B/O NT_016779AC106774179834301      
S/G/Y/R/B/O NT_016779AC068100181198191